Non-Coding RNA Search

Ss1.1-Tra1-TCH01D090042.5

Sequence:


               
               CAGGACTCCAGAGAGTTTTCAGATAGCAATTTGATTAAGCTTATGGGGAAGATCCCATCA
GATAACATTCTTTTTCTGCAGGTAGAGATAATGTGTTCAAGTATTAAGTATGTTTTAAAG
GTAATTATCTTTTCCATATTCATTTTAGTTACAGGAATTGAAAAGGGGGAGACATTGCCT
CTGAAAGCTGCCCCTTGGGCCCTGGAGTCACTCCGATGTCTCTCCTCTGGGAAACACAGT
GGAGGTTTTTGACAAATGAAGGAGCACTGGTGTGTCTGTTTTGCAGTGACTTGGGATCCC
CTGTCCCCTGGTCCAGGAGGCGGGGTCTTGGCCACTGTCCTCACCGGGCTCCCTCGCTTG
GACTCTCTGTCCGGGGCTGCTTTCTGGGCTCCTCATCCTAAGCTCCTGGGTCATGGAAGG
GGGCCTGGCTGCTGCTCAGAAAGAGGACTTGCCTCATCCAATGGTGAGTCGCAGGGCCAT
ATCCTCACCTTCCAAAATAGCACCTGGAATCACCATTTTCGTATATTATGCTCAGTTTGG
GGGTGTATTCAGATTAGAAGAGCCTACTTTGAGGTCTAGAATTCTAACATGTGTGGACTC
CTAGACTGCCCAACTGGAGCAAGAGGCATTAAGGATGGTGATCCTGAGCCTCAGAGAGGT
CCAGTCACGGACCCAGGATCACACAGCAAGTTAGGGAGACATACTGTTGACTAGAACCCA
GGAATCTTGCTCGTGGACCATTCCTCCGGTCCCCTCAACGCTGCCATCTCCAGAAAATGG
TCCTCTTCCCTTTTCCTGGAAATCTCCAGGGCAGGAGATTCTGCCCATGAGCCCTCCTTG
GTGGTCTGTTAGTCAGGGGCTGCCCTGAGAGCTGCCAGGGCCCCTGGGCTCTGCGAAGCC
CAGAGCAAGCACAGCACAGATGCTGTGGACGTTCTCAGACCTCACTCACCTACCAGCTGT
ACGTTTGTAAGCACGCTATCAATTTTTGCAAAATAGAAAAATCAGACCTAAATCCTACCT
TCAAAAAGCCAGCTATTGCTTGGGGTGGGAGTGGGGCTGGCGGTGCAACACTCGCATATC
TAAAAAGGTGATTGAGGATACAAGGCACTTGAATATGGCACATACTGTGGGGACCCAGAG
GTGGTGATTGAAGTGTCCCACATCCCTGTGTTTGCCTGAAATCCTTTCTGCTGCCGCCAG
AAACTCAGCAGTTCCTGTGCACAGGATCCTTCACATTANGTATCTGCCTGCTGGCCCAGG
AGCATGTGACAAGATGGGCTGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGACTCCAGAGAGTTTTCAGATAGCAATTTGATTAAGCTTATGGGGAAGATCCCATCA
GATAACATTCTTTTTCTGCAGGTAGAGATAATGTGTTCAAGTATTAAGTATGTTTTAAAG
GTAATTATCTTTTCCATATTCATTTTAGTTACAGGAATTGAAAAGGGGGAGACATTGCCT
CTGAAAGCTGCCCCTTGGGCCCTGGAGTCACTCCGATGTCTCTCCTCTGGGAAACACAGT
GGAGGTTTTTGACAAATGAAGGAGCACTGGTGTGTCTGTTTTGCAGTGACTTGGGATCCC
CTGTCCCCTGGTCCAGGAGGCGGGGTCTTGGCCACTGTCCTCACCGGGCTCCCTCGCTTG
GACTCTCTGTCCGGGGCTGCTTTCTGGGCTCCTCATCCTAAGCTCCTGGGTCATGGAAGG
GGGCCTGGCTGCTGCTCAGAAAGAGGACTTGCCTCATCCAATGGTGAGTCGCAGGGCCAT
ATCCTCACCTTCCAAAATAGCACCTGGAATCACCATTTTCGTATATTATGCTCAGTTTGG
GGGTGTATTCAGATTAGAAGAGCCTACTTTGAGGTCTAGAATTCTAACATGTGTGGACTC
CTAGACTGCCCAACTGGAGCAAGAGGCATTAAGGATGGTGATCCTGAGCCTCAGAGAGGT
CCAGTCACGGACCCAGGATCACACAGCAAGTTAGGGAGACATACTGTTGACTAGAACCCA
GGAATCTTGCTCGTGGACCATTCCTCCGGTCCCCTCAACGCTGCCATCTCCAGAAAATGG
TCCTCTTCCCTTTTCCTGGAAATCTCCAGGGCAGGAGATTCTGCCCATGAGCCCTCCTTG
GTGGTCTGTTAGTCAGGGGCTGCCCTGAGAGCTGCCAGGGCCCCTGGGCTCTGCGAAGCC
CAGAGCAAGCACAGCACAGATGCTGTGGACGTTCTCAGACCTCACTCACCTACCAGCTGT
ACGTTTGTAAGCACGCTATCAATTTTTGCAAAATAGAAAAATCAGACCTAAATCCTACCT
TCAAAAAGCCAGCTATTGCTTGGGGTGGGAGTGGGGCTGGCGGTGCAACACTCGCATATC
TAAAAAGGTGATTGAGGATACAAGGCACTTGAATATGGCACATACTGTGGGGACCCAGAG
GTGGTGATTGAAGTGTCCCACATCCCTGTGTTTGCCTGAAATCCTTTCTGCTGCCGCCAG
AAACTCAGCAGTTCCTGTGCACAGGATCCTTCACATTANGTATCTGCCTGCTGGCCCAGG
AGCATGTGACAAGATGGGCTGCAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-415, gnl|bosTau2|chr15 (10950534-10950110)
               

               
               1-415, gnl|Hg17|chr11 (113581576-113581990)
               

               
               1-415, gnl|Mm7|chr9 (48672708-48672331)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-415, gnl|bosTau2|chr15 (10950534-10950110)
               

               
               1-415, gnl|Hg17|chr11 (113581576-113581990)
               

               
               1-415, gnl|Mm7|chr9 (48672708-48672331)

	1-415, gnl\|bosTau2\|chr15 (10950534-10950110)
	1-415, gnl\|Hg17\|chr11 (113581576-113581990)
	1-415, gnl\|Mm7\|chr9 (48672708-48672331)