Ss1.1-Tra1-TCH01D110026.5
|
AGATATTCTGTGAGCTGCCTTGTGAGCAACATGACCGGTAGCCACGTTTGTTGCAACTTT
TTAAATATGTGGAAAAAAAGCAAGATATCGACCATGTATTACCTTAACCAAGATGCCAAA
TTATCTAACTTGTTTCTCCAGGCAAGCAGCCCAACCACAGGGACAGCCCCCAGGAGCCAG
TCACGCTTGTCTGTCTGTCCATCCACTCAGGACATCTGCAGGTAAGAGCTCAGCCCACGG
CCCTGACGGTGTTCCGTGGACCAGTGTTTTGTATTCTTGTCACATAATCTGAGACTGTGT
GGCTCTCGCTTCTGCCTTCGTTGTCTGTGGACGTTTGGTACCAGCCTAGTTTTTTCCCTT
TAGTGCAGTCCCTTCGTTTGATCTTTATTTTCCATCTTTGGGTCCATGCTGTCATCTTCA
TCACTCTCTCTCTCTCTCTCTCTGTTTCCCCATGGCTTTCCTCTCCATCTCCATCTCCCA
TCCTTCATCTGCTACTTTGTCTAGATCCTCACATGATGTGTCAGATGCGGCATTTGAGCC
AAGCACCCCTGTCACGGTGCTGAGCCCTGCTAGGAGGGAGACTGGTAAGAAATCAGTAAG
ACAGAGGCCTAGGAGGAGGAGGAGGGCAGCCCAGAGGTACGAGCACACAGAAAAAGAGGT
GAAAGAGGGCAGGAAGGCGTCTCACCTCCCAACTTCCAGCCCCCAATGGAGTGACCCTGA
CCCAAGGGCCTCAGACTCCTCTTCCCCGGATGAGAGTCACTGGATTCAGGCAAAGAGAAG
AGCCCAGGTGAAGTTCCGCCTGTCTCGGAAGGGAAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGATATTCTGTGAGCTGCCTTGTGAGCAACATGACCGGTAGCCACGTTTGTTGCAACTTT
TTAAATATGTGGAAAAAAAGCAAGATATCGACCATGTATTACCTTAACCAAGATGCCAAA
TTATCTAACTTGTTTCTCCAGGCAAGCAGCCCAACCACAGGGACAGCCCCCAGGAGCCAG
TCACGCTTGTCTGTCTGTCCATCCACTCAGGACATCTGCAGGTAAGAGCTCAGCCCACGG
CCCTGACGGTGTTCCGTGGACCAGTGTTTTGTATTCTTGTCACATAATCTGAGACTGTGT
GGCTCTCGCTTCTGCCTTCGTTGTCTGTGGACGTTTGGTACCAGCCTAGTTTTTTCCCTT
TAGTGCAGTCCCTTCGTTTGATCTTTATTTTCCATCTTTGGGTCCATGCTGTCATCTTCA
TCACTCTCTCTCTCTCTCTCTCTGTTTCCCCATGGCTTTCCTCTCCATCTCCATCTCCCA
TCCTTCATCTGCTACTTTGTCTAGATCCTCACATGATGTGTCAGATGCGGCATTTGAGCC
AAGCACCCCTGTCACGGTGCTGAGCCCTGCTAGGAGGGAGACTGGTAAGAAATCAGTAAG
ACAGAGGCCTAGGAGGAGGAGGAGGGCAGCCCAGAGGTACGAGCACACAGAAAAAGAGGT
GAAAGAGGGCAGGAAGGCGTCTCACCTCCCAACTTCCAGCCCCCAATGGAGTGACCCTGA
CCCAAGGGCCTCAGACTCCTCTTCCCCGGATGAGAGTCACTGGATTCAGGCAAAGAGAAG
AGCCCAGGTGAAGTTCCGCCTGTCTCGGAAGGGAAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
3-816, gnl|bosTau2|chr6 (42461-43309) |
|
3-816, gnl|canFam2|chr15 (62855428-62856246) |
|
3-816, gnl|dasNov1|scaffold_239437 (4-821) |
|
3-816, gnl|echTel1|scaffold_295891 (4464-3670) |
|
3-816, gnl|galGal2|chr4 (24018213-24019022) |
|
3-816, gnl|hg17|chr4 (164891350-164892170) |
|
3-816, gnl|Hg17|chr4 (164892289-164891475) |
|
3-816, gnl|loxAfr1|scaffold_20039 (41241-40420) |
|
3-816, gnl|mm7|chr8 (64843727-64842908) |
|
3-816, gnl|Mm7|chr8 (64842787-64843603) |
|
3-816, gnl|monDom2|scaffold_9 (37672935-37673777) |
|
3-816, gnl|oryCun1|scaffold_203715 (83444-82613) |
|
3-816, gnl|panTro1|chr3 (182362245-182363065) |
|
3-816, gnl|rheMac2|chr5 (155852899-155853720) |
|
3-816, gnl|rn3|chr16 (25055049-25055852) |
|
3-816, gnl|xenTro1|scaffold_478 (494357-493649) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-816, gnl|bosTau2|chr6 (42461-43309) |
|
3-816, gnl|canFam2|chr15 (62855428-62856246) |
|
3-816, gnl|dasNov1|scaffold_239437 (4-821) |
|
3-816, gnl|echTel1|scaffold_295891 (4464-3670) |
|
3-816, gnl|galGal2|chr4 (24018213-24019022) |
|
3-816, gnl|hg17|chr4 (164891350-164892170) |
|
3-816, gnl|Hg17|chr4 (164892289-164891475) |
|
3-816, gnl|loxAfr1|scaffold_20039 (41241-40420) |
|
3-816, gnl|mm7|chr8 (64843727-64842908) |
|
3-816, gnl|Mm7|chr8 (64842787-64843603) |
|
3-816, gnl|monDom2|scaffold_9 (37672935-37673777) |
|
3-816, gnl|oryCun1|scaffold_203715 (83444-82613) |
|
3-816, gnl|panTro1|chr3 (182362245-182363065) |
|
3-816, gnl|rheMac2|chr5 (155852899-155853720) |
|
3-816, gnl|rn3|chr16 (25055049-25055852) |
|
3-816, gnl|xenTro1|scaffold_478 (494357-493649) |
