Ss1.1-Tra1-TCH01E020007.5
               |  | CATTACTGAAGCAGTTCGTATTTATTACATGTTAAGGATAAAGTGGCAATAAAGTGCAGT
TGCACAACAAAACAAATTTTAAATCCCTAAAATTCCCCAATCAATAAGGGATGCCCTGAT
ACTTTCTCTTGGTGCTTCCTTTGAGTTCCACTGCTTCCTTAATCACAACATGAAACACTT
GACGTAAAAATTGCAAAGGGCCTGTGCTGACTTTGTTCAGATAGAGTTTGGAGTAAATAA
AAATGGTCTTAAAAACTTCTGCCAAAGATTATAATAGAGTCTTTGATTCTGAGCTGCATT
GTAATTTAGGGGAAGTCAACTATAAAATACCGTTTCTGGCACTGCCATCTCTAATGAAAT
TGTTTTAGAGTGGAAAATTTCAATTGATAGTCCCTCTAGTTGTTAAATCTCATTCTGAGT
TGCTGTTTGTTTGTGTGGGTGTACGTTGTGCACTAGTCCTAGAGGTGGAATGGGGATTTT
ATACCCCTCAGTCATGCATGAGGATAAAATGACATGGCTCTTCTGACTCCTTCAAAGGAT
CATCACTGAATCCATGTGCAGTTGGCTCCCTGTGTGAAAGATACACTTGGCTCTAAGTAG
AGATAGTCACACTTATCTGTAAATTTGCTTTGAGAAACTAGAAGAATGGAAGCGTTATCG
TTTATGACAAAATACAAATGCAGAAGTGTATTTGGAAAGATTATTCCAAGGTTTATAAGA
TTTTGGGGTGTTTAGATTTATCAATTTTTACCTTTTTAATGTAGAGAGGTATTGCTGTAG
TGACAGAGTATACTGAAGTATGGTATAGAAAGAGTAATGGTACTCCCTGATAACTCAGTC | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CATTACTGAAGCAGTTCGTATTTATTACATGTTAAGGATAAAGTGGCAATAAAGTGCAGT
TGCACAACAAAACAAATTTTAAATCCCTAAAATTCCCCAATCAATAAGGGATGCCCTGAT
ACTTTCTCTTGGTGCTTCCTTTGAGTTCCACTGCTTCCTTAATCACAACATGAAACACTT
GACGTAAAAATTGCAAAGGGCCTGTGCTGACTTTGTTCAGATAGAGTTTGGAGTAAATAA
AAATGGTCTTAAAAACTTCTGCCAAAGATTATAATAGAGTCTTTGATTCTGAGCTGCATT
GTAATTTAGGGGAAGTCAACTATAAAATACCGTTTCTGGCACTGCCATCTCTAATGAAAT
TGTTTTAGAGTGGAAAATTTCAATTGATAGTCCCTCTAGTTGTTAAATCTCATTCTGAGT
TGCTGTTTGTTTGTGTGGGTGTACGTTGTGCACTAGTCCTAGAGGTGGAATGGGGATTTT
ATACCCCTCAGTCATGCATGAGGATAAAATGACATGGCTCTTCTGACTCCTTCAAAGGAT
CATCACTGAATCCATGTGCAGTTGGCTCCCTGTGTGAAAGATACACTTGGCTCTAAGTAG
AGATAGTCACACTTATCTGTAAATTTGCTTTGAGAAACTAGAAGAATGGAAGCGTTATCG
TTTATGACAAAATACAAATGCAGAAGTGTATTTGGAAAGATTATTCCAAGGTTTATAAGA
TTTTGGGGTGTTTAGATTTATCAATTTTTACCTTTTTAATGTAGAGAGGTATTGCTGTAG
TGACAGAGTATACTGAAGTATGGTATAGAAAGAGTAATGGTACTCCCTGATAACTCAGTC | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map