Ss1.1-Tra1-TCH01E110012.5
|
ATTCGGCGGCGATGGAGCGGCCCCGGGGAGCTGCGCAGGGCCTCTCGCGCTGGCCCCACG
GCCTCGGCCTCCTTCTCCTCCTCCTCCTCCAGCTGCTGCCGCCGGCAAGCCTCGGCCAGG
ACCGGCTGGACGCGCCGCCGCCGCCCGCTGCGCCGCTGTCGCGCTGGTCCGGCCCCGTCG
GGGTGAGCTGGGGGCTGCGCGCGGCCGCGCCTGGGGGCCCGGTTCCCCGCGGCGGCCGTT
GGCGCCGCAGCGCGCTCGATGAGGACGAGGACTGCGGCGGGGTCCGGGACTTCGTCGCCA
GGCTGGCCAACAACACACACCAGCATGTGTTTGATGATCTCAGTGGCTCGGTGTCCTTGT
CCTGGGTTGGGGATAGCACTGGGATCATCCTAGTCCTGACTACCTTCCATGTACCACTGG
TAATTATGACTTTTGGACAGTCCAAGCTGTATCGAAGTGAGGACTATGGAAAGAACTTTA
AGGATATTACAAATCTCATCAATAACACCTTCATTCGAACTGAATTTGGCATGGCTATTG
GTCCTGAGAACTCTGGGAAGGTGATTTTAACAGCAGAGGTGTCGGGGGGAAGTCATGGAG
GAAGAATCTTCAGATCATCAGATTTTGCAAAGAACTTCATTCAGACCAACCTCCCTTTTC
ACCCTCTGACTCAGATGATGTATAGCCCTCAGAATTCTGATCATCTGTTAGCCCTCAGCA
CCGAAAATGGCCTGTGGGTGTCCAAGAATTTTGGGGGAAAATGGGAAGAAATCCACAAAG
CAGTATGTTTGGCCAAATGGGGATCAGACAGGACCATCTTCTTCACCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATTCGGCGGCGATGGAGCGGCCCCGGGGAGCTGCGCAGGGCCTCTCGCGCTGGCCCCACG
GCCTCGGCCTCCTTCTCCTCCTCCTCCTCCAGCTGCTGCCGCCGGCAAGCCTCGGCCAGG
ACCGGCTGGACGCGCCGCCGCCGCCCGCTGCGCCGCTGTCGCGCTGGTCCGGCCCCGTCG
GGGTGAGCTGGGGGCTGCGCGCGGCCGCGCCTGGGGGCCCGGTTCCCCGCGGCGGCCGTT
GGCGCCGCAGCGCGCTCGATGAGGACGAGGACTGCGGCGGGGTCCGGGACTTCGTCGCCA
GGCTGGCCAACAACACACACCAGCATGTGTTTGATGATCTCAGTGGCTCGGTGTCCTTGT
CCTGGGTTGGGGATAGCACTGGGATCATCCTAGTCCTGACTACCTTCCATGTACCACTGG
TAATTATGACTTTTGGACAGTCCAAGCTGTATCGAAGTGAGGACTATGGAAAGAACTTTA
AGGATATTACAAATCTCATCAATAACACCTTCATTCGAACTGAATTTGGCATGGCTATTG
GTCCTGAGAACTCTGGGAAGGTGATTTTAACAGCAGAGGTGTCGGGGGGAAGTCATGGAG
GAAGAATCTTCAGATCATCAGATTTTGCAAAGAACTTCATTCAGACCAACCTCCCTTTTC
ACCCTCTGACTCAGATGATGTATAGCCCTCAGAATTCTGATCATCTGTTAGCCCTCAGCA
CCGAAAATGGCCTGTGGGTGTCCAAGAATTTTGGGGGAAAATGGGAAGAAATCCACAAAG
CAGTATGTTTGGCCAAATGGGGATCAGACAGGACCATCTTCTTCACCA
|
|
gi|61844731|ref|XP_604391.1| |
Protein identifier
|
gi|61844731|ref|XP_604391.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
559-725, gnl|bosTau2|chr3 (26083649-26083815) |
|
559-725, gnl|canFam2|chr6 (45547078-45546869) |
|
559-725, gnl|danRer3|chr11 (38513991-38513796) |
|
559-725, gnl|dasNov1|scaffold_225182 (4176-3967) |
|
559-725, gnl|echTel1|scaffold_319338 (5157-4948) |
|
559-725, gnl|fr1|chrUn (75235273-75235081) |
|
559-725, gnl|hg17|chr1 (109609023-109609231) |
|
559-725, gnl|Hg17|chr1 (109609197-109609031) |
|
559-725, gnl|loxAfr1|scaffold_94400 (12566-12775) |
|
559-725, gnl|mm7|chr3 (108144111-108143900) |
|
559-725, gnl|Mm7|chr3 (108143935-108144101) |
|
559-725, gnl|monDom2|scaffold_0 (7300655-7300447) |
|
559-725, gnl|oryCun1|scaffold_198736 (32251-32455) |
|
559-725, gnl|rheMac2|chr1 (112409978-112410186) |
|
559-725, gnl|rn3|chr2 (203856585-203856376) |
|
559-725, gnl|tetNig1|chr9 (2949948-2949741) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
559-725, gnl|bosTau2|chr3 (26083649-26083815) |
|
559-725, gnl|canFam2|chr6 (45547078-45546869) |
|
559-725, gnl|danRer3|chr11 (38513991-38513796) |
|
559-725, gnl|dasNov1|scaffold_225182 (4176-3967) |
|
559-725, gnl|echTel1|scaffold_319338 (5157-4948) |
|
559-725, gnl|fr1|chrUn (75235273-75235081) |
|
559-725, gnl|hg17|chr1 (109609023-109609231) |
|
559-725, gnl|Hg17|chr1 (109609197-109609031) |
|
559-725, gnl|loxAfr1|scaffold_94400 (12566-12775) |
|
559-725, gnl|mm7|chr3 (108144111-108143900) |
|
559-725, gnl|Mm7|chr3 (108143935-108144101) |
|
559-725, gnl|monDom2|scaffold_0 (7300655-7300447) |
|
559-725, gnl|oryCun1|scaffold_198736 (32251-32455) |
|
559-725, gnl|rheMac2|chr1 (112409978-112410186) |
|
559-725, gnl|rn3|chr2 (203856585-203856376) |
|
559-725, gnl|tetNig1|chr9 (2949948-2949741) |
