Non-Coding RNA Search

Ss1.1-Tra1-TCH01F020031.5

Sequence:


               
               GCGGTGCCTCGGAAGCCGAAGGGGGTGGGAGGCGCAGGTCTCGCCGCCCTGACCCGGCGC
TAGGGGCCCCCGCGACTCGCTCAAGCCGAGCCCGGCGCAGCTGCAAGCGCCGGAAACTGG
CCCAGGTCAGCCGAACCCGAGCGCGGTCCCCGAACTCGGCGGCGCGCTCCACCCGGATTC
CCCACGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGGGCGGGGCCCTCCCCGCGCCGTGA
CCTCCGGGCGCCCGGGCCCGAGCTCCCTGCTCTTACCAAGGCCGCCAGTTGCTTGCCAGC
CTTCATGCCCTGGCCCACGGCAGTGCACCTGGAGAAGGACTCCTGGAAGCCTAAGAACTT
GAACTTAACCCTGAGTAAATAGGCTTTAGAGATAGCCTCACCATGTGTGGCAGACTGATC
GAGAGGTATGTGGCTGCCATGGTGCTGAGTGCAGCTGGAGATGCCTTGGGGTACTTCAAC
GGGAAGTGGGAGTTCCTTCGGGATGGGGAAAAGATTCACAAGCAGCTGGCCCAGCTTGGC
GGCTTGGATGCCATAGACGTGGAGAGGTGGAGAGTCAGCGATGACACGGTGATGCACCTG
GCCACGGCAGAAGCCCTCCTGGAAGCTGGCCCAGGCTTGGACTGGGCTCGCCTGTATTCC
CTCCTTGCTAGGCACTACCAAGATTGCATGGGAGACATGGACGGCCGGGCACCAGGGGGT
GCATCCGTGCAGAACGCCATGCTGCTGGAGCCAGACAAACCCAATGGCTGGAGGATTCCC
TTTAACAGCCATGAGGGCGGCTGTGGGGCTGCCATGCGGGCTATGTGCATCGGCCTCCGG
TTCCCTCACCACAGCCAGCTGGACACCCTGATCCAGGTGAGCATCGAGAGCGGCCGGATG
ACCCACCACCACCCCACAGGCTACCTGGGAGCCCTTGTGTCTGCTCTTTTTACAGCCTAT
GCTGTGAATGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGTGCCTCGGAAGCCGAAGGGGGTGGGAGGCGCAGGTCTCGCCGCCCTGACCCGGCGC
TAGGGGCCCCCGCGACTCGCTCAAGCCGAGCCCGGCGCAGCTGCAAGCGCCGGAAACTGG
CCCAGGTCAGCCGAACCCGAGCGCGGTCCCCGAACTCGGCGGCGCGCTCCACCCGGATTC
CCCACGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGGGCGGGGCCCTCCCCGCGCCGTGA
CCTCCGGGCGCCCGGGCCCGAGCTCCCTGCTCTTACCAAGGCCGCCAGTTGCTTGCCAGC
CTTCATGCCCTGGCCCACGGCAGTGCACCTGGAGAAGGACTCCTGGAAGCCTAAGAACTT
GAACTTAACCCTGAGTAAATAGGCTTTAGAGATAGCCTCACCATGTGTGGCAGACTGATC
GAGAGGTATGTGGCTGCCATGGTGCTGAGTGCAGCTGGAGATGCCTTGGGGTACTTCAAC
GGGAAGTGGGAGTTCCTTCGGGATGGGGAAAAGATTCACAAGCAGCTGGCCCAGCTTGGC
GGCTTGGATGCCATAGACGTGGAGAGGTGGAGAGTCAGCGATGACACGGTGATGCACCTG
GCCACGGCAGAAGCCCTCCTGGAAGCTGGCCCAGGCTTGGACTGGGCTCGCCTGTATTCC
CTCCTTGCTAGGCACTACCAAGATTGCATGGGAGACATGGACGGCCGGGCACCAGGGGGT
GCATCCGTGCAGAACGCCATGCTGCTGGAGCCAGACAAACCCAATGGCTGGAGGATTCCC
TTTAACAGCCATGAGGGCGGCTGTGGGGCTGCCATGCGGGCTATGTGCATCGGCCTCCGG
TTCCCTCACCACAGCCAGCTGGACACCCTGATCCAGGTGAGCATCGAGAGCGGCCGGATG
ACCCACCACCACCCCACAGGCTACCTGGGAGCCCTTGTGTCTGCTCTTTTTACAGCCTAT
GCTGTGAATGGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|202759|gb|AAA40691.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|202759|gb|AAA40691.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               712-972, gnl|bosTau2|chr1 (29786765-29787025)
               

               
               712-972, gnl|Hg17|chr3 (120787817-120788078)
               

               
               712-972, gnl|Mm7|chr16 (38154833-38154572)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               712-972, gnl|bosTau2|chr1 (29786765-29787025)
               

               
               712-972, gnl|Hg17|chr3 (120787817-120788078)
               

               
               712-972, gnl|Mm7|chr16 (38154833-38154572)

	712-972, gnl\|bosTau2\|chr1 (29786765-29787025)
	712-972, gnl\|Hg17\|chr3 (120787817-120788078)
	712-972, gnl\|Mm7\|chr16 (38154833-38154572)