Ss1.1-Tra1-TCH01F040068.5
               |  | TTTTTAAATGGCCCTCCTGTGGGAAGTAAATGTTAAAATTACAGCAGATGTCAGTTCCTG
AAACAAAATTCAGGAAACACTTTCTGGTATGTGGGTGTTGTGACTTTTCACTTCTTGGAA
CTTTCCTTCAGGAAACTGTCCTGTCAAAAGCAGAACAGTTGATAAAATATGAAGCACAAT
TCACAAACTGTGTCGTGCAGTGTAATTAAATTTTGATTTGGGGCATGTGTTTTTGTGCTG
GTGATGGAGCTGAGACTATCATGTGACTTTCATCCTGGATACTGTGCATCTGGATAACTT
GTTAAATGGCTTCTCTCTCCCCCGTCTCGCTGCTTGAAAAATACAGGTGTATCTGATTTA
CTCTGGATGTGAATTTATGGAAAGTGGTATAAAATGAACCAGTTCCCATTGTTTTTTGTA
CAAAAGTACAAAACCTGTTTCCTTTCCAGCTTTTTCTGTAATTTGCAGAAATTACATATT
TTTGTCTCATGATTGACCAATTACTATTTCTATCGTAGACATTTCTGAGATGGCCTGTCT
AGTGGGTAGCAATAGCTGGCAAAATGCTGATTAGAGTTTGAGTCTATGATACTAGGATTT
TAACTTTTTTCTTTCAATGAAAATAACCTCTCATTGAGTTAATATGCTGTTTTAAGTAGG
GTGTTTTTTTTGCTGTTAAAAAAATGGTATGTATTAGTTCAAAGTTTTGGACAATAAAAC
ATAGCTGAAGCCCTCATGTTATTTTCAAGTAACTTTGACCTGGCATTT | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | TTTTTAAATGGCCCTCCTGTGGGAAGTAAATGTTAAAATTACAGCAGATGTCAGTTCCTG
AAACAAAATTCAGGAAACACTTTCTGGTATGTGGGTGTTGTGACTTTTCACTTCTTGGAA
CTTTCCTTCAGGAAACTGTCCTGTCAAAAGCAGAACAGTTGATAAAATATGAAGCACAAT
TCACAAACTGTGTCGTGCAGTGTAATTAAATTTTGATTTGGGGCATGTGTTTTTGTGCTG
GTGATGGAGCTGAGACTATCATGTGACTTTCATCCTGGATACTGTGCATCTGGATAACTT
GTTAAATGGCTTCTCTCTCCCCCGTCTCGCTGCTTGAAAAATACAGGTGTATCTGATTTA
CTCTGGATGTGAATTTATGGAAAGTGGTATAAAATGAACCAGTTCCCATTGTTTTTTGTA
CAAAAGTACAAAACCTGTTTCCTTTCCAGCTTTTTCTGTAATTTGCAGAAATTACATATT
TTTGTCTCATGATTGACCAATTACTATTTCTATCGTAGACATTTCTGAGATGGCCTGTCT
AGTGGGTAGCAATAGCTGGCAAAATGCTGATTAGAGTTTGAGTCTATGATACTAGGATTT
TAACTTTTTTCTTTCAATGAAAATAACCTCTCATTGAGTTAATATGCTGTTTTAAGTAGG
GTGTTTTTTTTGCTGTTAAAAAAATGGTATGTATTAGTTCAAAGTTTTGGACAATAAAAC
ATAGCTGAAGCCCTCATGTTATTTTCAAGTAACTTTGACCTGGCATTT | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map