Non-Coding RNA Search

Ss1.1-Tra1-TCH01G110024.5

Sequence:


               
               AAGGAGTGAGGCTTTCTTAACCCCATCTTGGCAGGTGGGTAATTTTTGGCAGGAGGGAGA
AGCCAGCGTTACTTGCTCTGAGTAGAGATGGTTATGCAAGATGCAAGGAGGAGGAGGAAG
CTGAGAGGGGAGCTGGTGAGTCAGAGGAGAAAAGCTGCACAACTTGGCTAGCAGTGAGCC
TTTAGAGCACTGGCGAAGCCTAAGCCATTAACAAGTCTTCCACTTCAGCATGACACTGCT
CAAAAAAATGAAGCTACTGCTGTTCCTGGCTTCCCAGATGGCCATCTTTGTTCTGTTCAT
CCGCCTGTACTGCCACAACCTCAACTCCCTGCATATGAAGGAGGAGCCCAAGCCCACACA
CATGCACGTGCTGATCCTGTCTTCGTGGCGCTCTGGTTCCTCTTTTGTGGGGCAGCTTTT
TGGACAGCACCCAGATGTCTTCTACCTGATGGAGCCTGCCTGGCACGTCTGGATGACCTT
CACGCAGAGCACCGCCCAGAGGCTGCATATGGCAGTACGGGATCTCATACGGGCTGTCTT
TCTGTGTGACATGAGTGTCTTTGATGCCTACATGACACCTGGCCCCCGAAAGCAGTCCAG
CCTCTTCCAGTGGGAGGGCAGCCGGGCCCTCTGTTCCCCACCTGCCTGTAACATCTTCCC
ACGAGATATGATCATACCCCAGGCTCACTGCAGGCTTCTGTGCAATCAGCAGCCCTTTGA
GGTGGTAGAGAAGGCCTGCCGCTCCTACAGCCACGTGGTCCTCAAGGAGGTGCGCTTCTT
CAACCTGCAGGTGCTCTACCCATTGCTGAGAGACCCCTCCCTCAACCTGCACATTGTGCA
CCTGGTCCGGGACCCCCGGGCAGTGTTCCGCTCCCGAGAACACACCACACAGGAACTCCT
GATTGACAGCCACATTGTGATGGGGCAGCATCACCAGAAACTCAAGAAGGAGGATCAACC
CTACTACGCAATGCAAGTCATCTGCCAAAGCCAGCTGGAGATCTTTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGGAGTGAGGCTTTCTTAACCCCATCTTGGCAGGTGGGTAATTTTTGGCAGGAGGGAGA
AGCCAGCGTTACTTGCTCTGAGTAGAGATGGTTATGCAAGATGCAAGGAGGAGGAGGAAG
CTGAGAGGGGAGCTGGTGAGTCAGAGGAGAAAAGCTGCACAACTTGGCTAGCAGTGAGCC
TTTAGAGCACTGGCGAAGCCTAAGCCATTAACAAGTCTTCCACTTCAGCATGACACTGCT
CAAAAAAATGAAGCTACTGCTGTTCCTGGCTTCCCAGATGGCCATCTTTGTTCTGTTCAT
CCGCCTGTACTGCCACAACCTCAACTCCCTGCATATGAAGGAGGAGCCCAAGCCCACACA
CATGCACGTGCTGATCCTGTCTTCGTGGCGCTCTGGTTCCTCTTTTGTGGGGCAGCTTTT
TGGACAGCACCCAGATGTCTTCTACCTGATGGAGCCTGCCTGGCACGTCTGGATGACCTT
CACGCAGAGCACCGCCCAGAGGCTGCATATGGCAGTACGGGATCTCATACGGGCTGTCTT
TCTGTGTGACATGAGTGTCTTTGATGCCTACATGACACCTGGCCCCCGAAAGCAGTCCAG
CCTCTTCCAGTGGGAGGGCAGCCGGGCCCTCTGTTCCCCACCTGCCTGTAACATCTTCCC
ACGAGATATGATCATACCCCAGGCTCACTGCAGGCTTCTGTGCAATCAGCAGCCCTTTGA
GGTGGTAGAGAAGGCCTGCCGCTCCTACAGCCACGTGGTCCTCAAGGAGGTGCGCTTCTT
CAACCTGCAGGTGCTCTACCCATTGCTGAGAGACCCCTCCCTCAACCTGCACATTGTGCA
CCTGGTCCGGGACCCCCGGGCAGTGTTCCGCTCCCGAGAACACACCACACAGGAACTCCT
GATTGACAGCCACATTGTGATGGGGCAGCATCACCAGAAACTCAAGAAGGAGGATCAACC
CTACTACGCAATGCAAGTCATCTGCCAAAGCCAGCTGGAGATCTTTGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61856318|ref|XP_584567.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61856318|ref|XP_584567.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               363-924, gnl|bosTau2|chr18 (1737215-1737773)
               

               
               363-924, gnl|Hg17|chr16 (74071106-74070548)
               

               
               363-924, gnl|Mm7|chr8 (110490910-110490352)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               363-924, gnl|bosTau2|chr18 (1737215-1737773)
               

               
               363-924, gnl|Hg17|chr16 (74071106-74070548)
               

               
               363-924, gnl|Mm7|chr8 (110490910-110490352)

	363-924, gnl\|bosTau2\|chr18 (1737215-1737773)
	363-924, gnl\|Hg17\|chr16 (74071106-74070548)
	363-924, gnl\|Mm7\|chr8 (110490910-110490352)