Ss1.1-Tra1-TCH01H020027.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTCCCGCCAGAGCCCGAGCAGCCTGCCGGTAACGGTCGCAGAGGCGCGGGGAGGGAGGG AAAAGAAGGAGGTTTAAGTTATATTTTAAAAAACCGAGATCGAGAGCCAGAGGCATCGCG ACCCAGGTGTCGTCGCTTCCTGCTACAAAGGGCTCAGCGCCCAGGTCCCTCCTTCCTCAA GCCCCTTCCTCTCCTGCCCTCCCTTCTGGAGCAGTGCGGCGCTCAAGCGGCGGCAGTGGA GGATCGCCCGGCCGCTGCAGCCCCAGCGGCCGCGGAGAAGGAGGGAGGGAAGCACAAAGC CGGCTGCGAGCTGCGAGCTGCGAGGTGACAAGGGATATCGGCGGACTTGAAGCATGAGTT CAGATGCTAGCCAAGGTGTGGTTACTACTCCTCCTCCTCCCAGCATGCCTCACAAAGAGA GGTATTTTGACCGTATCAATGAAAATGACCCAGAATACATAAGGGAGAGGAACATGTCTC CTGATCTACGACAAGACTTCAATATGATGGAGCAAAGGAAACGAGTTACTCAAATCTTGC AAAGTCCGGCCTTTCGGGAAGACCTGGAATGCCTAATTCAGGAACAGATGAAGAAAGGCC ACAATCCAACTGGATTACTAGCATTACAACAGATTGCAGATTACATCATGGCCAATTCTT TTTCGGGCTTTACTTCACCTCCCCTCAGTCTCGGCATGGTCACACCTATCAATGACCTTC CTGGGGCAGATACATCCTCATACGTGAAGGGAGAAAAGCTTACTCGTTGTAAACTTGCCA GCCTGTACAGACTTGCAGACTTGTTTGGATGGGCCCACCTGGCAAATACATATATCTCAG TAAGAATAAGTAAGGAGCAAGACCCATAATAATAATTCCCAGAGGTCTGTCATTTTCTGA AGCCACAGCCTCCAATTTGGTGAAAGTCAATATCATAGGAGAAGTAGTGGATCAGGGAAG GTACTAATTTAAAAATTGACCATAAGGATTCAGTCCCATGCTGCAATCTCTCACACGTCT GATGTTAAGTGCAGTGCGTGATACATACCTTGCACAGCAGCTGGTATCCTCCNTGAAGTG TGGGATCCTTCCATTTNTCAAGAGTCCTGATGCCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTCCCGCCAGAGCCCGAGCAGCCTGCCGGTAACGGTCGCAGAGGCGCGGGGAGGGAGGG AAAAGAAGGAGGTTTAAGTTATATTTTAAAAAACCGAGATCGAGAGCCAGAGGCATCGCG ACCCAGGTGTCGTCGCTTCCTGCTACAAAGGGCTCAGCGCCCAGGTCCCTCCTTCCTCAA GCCCCTTCCTCTCCTGCCCTCCCTTCTGGAGCAGTGCGGCGCTCAAGCGGCGGCAGTGGA GGATCGCCCGGCCGCTGCAGCCCCAGCGGCCGCGGAGAAGGAGGGAGGGAAGCACAAAGC CGGCTGCGAGCTGCGAGCTGCGAGGTGACAAGGGATATCGGCGGACTTGAAGCATGAGTT CAGATGCTAGCCAAGGTGTGGTTACTACTCCTCCTCCTCCCAGCATGCCTCACAAAGAGA GGTATTTTGACCGTATCAATGAAAATGACCCAGAATACATAAGGGAGAGGAACATGTCTC CTGATCTACGACAAGACTTCAATATGATGGAGCAAAGGAAACGAGTTACTCAAATCTTGC AAAGTCCGGCCTTTCGGGAAGACCTGGAATGCCTAATTCAGGAACAGATGAAGAAAGGCC ACAATCCAACTGGATTACTAGCATTACAACAGATTGCAGATTACATCATGGCCAATTCTT TTTCGGGCTTTACTTCACCTCCCCTCAGTCTCGGCATGGTCACACCTATCAATGACCTTC CTGGGGCAGATACATCCTCATACGTGAAGGGAGAAAAGCTTACTCGTTGTAAACTTGCCA GCCTGTACAGACTTGCAGACTTGTTTGGATGGGCCCACCTGGCAAATACATATATCTCAG TAAGAATAAGTAAGGAGCAAGACCCATAATAATAATTCCCAGAGGTCTGTCATTTTCTGA AGCCACAGCCTCCAATTTGGTGAAAGTCAATATCATAGGAGAAGTAGTGGATCAGGGAAG GTACTAATTTAAAAATTGACCATAAGGATTCAGTCCCATGCTGCAATCTCTCACACGTCT GATGTTAAGTGCAGTGCGTGATACATACCTTGCACAGCAGCTGGTATCCTCCNTGAAGTG TGGGATCCTTCCATTTNTCAAGAGTCCTGATGCCTG |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 1-317, gnl|bosTau2|chr26 (19732121-19731804) | |
| 1-317, gnl|canFam2|chr28 (24405150-24405617) | |
| 1-317, gnl|dasNov1|scaffold_40620 (9799-10219) | |
| 1-317, gnl|echTel1|scaffold_276907 (60971-60531) | |
| 1-317, gnl|hg17|chr10 (111757632-111758101) | |
| 1-317, gnl|Hg17|chr10 (111757723-111758047) | |
| 1-317, gnl|mm7|chr19 (53043300-53043759) | |
| 1-317, gnl|Mm7|chr19 (53043421-53043723) | |
| 1-317, gnl|monDom2|scaffold_14 (53438035-53437559) | |
| 1-317, gnl|oryCun1|scaffold_201983 (52271-51809) | |
| 1-317, gnl|rheMac2|chr9 (109692708-109693179) | |
| 1-317, gnl|rn3|chr1 (259664340-259663882) | |
| 331-549, gnl|bosTau2|chr26 (19633063-19632844) | |
| 331-549, gnl|canFam2|chr3 (64218600-64218397) | |
| 331-549, gnl|danRer3|chr21 (40712-40508) | |
| 331-549, gnl|dasNov1|scaffold_54998 (9463-9641) | |
| 331-549, gnl|echTel1|scaffold_319887 (46717-46510) | |
| 331-549, gnl|fr1|chrUn (112135644-112135438) | |
| 331-549, gnl|galGal2|chr4 (82628180-82627974) | |
| 331-549, gnl|Hg17|chr10 (111850378-111850597) | |
| 331-549, gnl|hg17|chr4 (2914647-2914853) | |
| 331-549, gnl|loxAfr1|scaffold_7782 (33491-33285) | |
| 331-549, gnl|Mm7|chr19 (53117438-53117650) | |
| 331-549, gnl|mm7|chr5 (33663898-33664105) | |
| 331-549, gnl|monDom2|scaffold_10 (41361446-41361240) | |
| 331-549, gnl|oryCun1|scaffold_125199 (1815-1609) | |
| 331-549, gnl|panTro1|chr3 (2963995-2964201) | |
| 331-549, gnl|rheMac2|chr1 (1074311-1074105) | |
| 331-549, gnl|rn3|chr14 (81784559-81784353) | |
| 331-549, gnl|tetNig1|chr4 (3264865-3265071) | |
| 331-549, gnl|xenTro1|scaffold_1065 (187056-187262) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-317, gnl|bosTau2|chr26 (19732121-19731804) | |
| 1-317, gnl|canFam2|chr28 (24405150-24405617) | |
| 1-317, gnl|dasNov1|scaffold_40620 (9799-10219) | |
| 1-317, gnl|echTel1|scaffold_276907 (60971-60531) | |
| 1-317, gnl|hg17|chr10 (111757632-111758101) | |
| 1-317, gnl|Hg17|chr10 (111757723-111758047) | |
| 1-317, gnl|mm7|chr19 (53043300-53043759) | |
| 1-317, gnl|Mm7|chr19 (53043421-53043723) | |
| 1-317, gnl|monDom2|scaffold_14 (53438035-53437559) | |
| 1-317, gnl|oryCun1|scaffold_201983 (52271-51809) | |
| 1-317, gnl|rheMac2|chr9 (109692708-109693179) | |
| 1-317, gnl|rn3|chr1 (259664340-259663882) | |
| 331-549, gnl|bosTau2|chr26 (19633063-19632844) | |
| 331-549, gnl|canFam2|chr3 (64218600-64218397) | |
| 331-549, gnl|danRer3|chr21 (40712-40508) | |
| 331-549, gnl|dasNov1|scaffold_54998 (9463-9641) | |
| 331-549, gnl|echTel1|scaffold_319887 (46717-46510) | |
| 331-549, gnl|fr1|chrUn (112135644-112135438) | |
| 331-549, gnl|galGal2|chr4 (82628180-82627974) | |
| 331-549, gnl|Hg17|chr10 (111850378-111850597) | |
| 331-549, gnl|hg17|chr4 (2914647-2914853) | |
| 331-549, gnl|loxAfr1|scaffold_7782 (33491-33285) | |
| 331-549, gnl|Mm7|chr19 (53117438-53117650) | |
| 331-549, gnl|mm7|chr5 (33663898-33664105) | |
| 331-549, gnl|monDom2|scaffold_10 (41361446-41361240) | |
| 331-549, gnl|oryCun1|scaffold_125199 (1815-1609) | |
| 331-549, gnl|panTro1|chr3 (2963995-2964201) | |
| 331-549, gnl|rheMac2|chr1 (1074311-1074105) | |
| 331-549, gnl|rn3|chr14 (81784559-81784353) | |
| 331-549, gnl|tetNig1|chr4 (3264865-3265071) | |
| 331-549, gnl|xenTro1|scaffold_1065 (187056-187262) |