Non-Coding RNA Search

Ss1.1-Utr1-UTR010005B06.5

Sequence:


               
               ACATGAGCCTTTAAAATTGGAAGAGAAAGCCAGGAAAATGAGTCAGAGAAATGAGACCGA
AGAAGAGGCAGGAGAGGCTCGAAGCTTGAGAAGGTCACAGACCTTGGCTTTGAAGGTGGA
AGAAGAGGGCCATGTCCAAGAGGGCAGGCTCTGGAAGGTGGGAACAGCAGTCAGATGACA
GCCAGCAAGGAAATGGGGGCCTCAGTCCTACAACCACAAGGAACTAATTCTGCCAACAAC
CTGCATGAGCAAGCAAAGGGGTTTTCCCCTAGAGCTTCCAGAAGGGAATGCCGCCCTGCC
ACCACCTTGGTTTTAGCCGGGAGAGATGATATCAGACTTCCAACCTGCAGTACTGTATGT
AGCATAGTAACTTAGTTTTAAGTTTCTACATTTATGGTGATTTGATACTTAAGCAATAGA
AAAACAATACTGAATGCCAAGCATGACTTAATTGTTTTTTTTTCTTTCTTTTTCTTTTTA
GGATCGATCCTATGGCATATGGAAATTCCCAGGCTAGGGGTTGAATTGGAGCTACAGCTG
CCGGCCTATGCCACAGCCACTGCAACGCAGGATCTGAGTTGCATCTGTAACCTACACCTC
AGCTCACAGCAATGCTGGCTCCTTAACTCACTGAAGGAGGCCAGGGATCAAACCTGTGTC
CTCATAGATACCGCTGAGCCATGATGGGAACTCCACGACTTAATATCTTATTGCAGTGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATGAGCCTTTAAAATTGGAAGAGAAAGCCAGGAAAATGAGTCAGAGAAATGAGACCGA
AGAAGAGGCAGGAGAGGCTCGAAGCTTGAGAAGGTCACAGACCTTGGCTTTGAAGGTGGA
AGAAGAGGGCCATGTCCAAGAGGGCAGGCTCTGGAAGGTGGGAACAGCAGTCAGATGACA
GCCAGCAAGGAAATGGGGGCCTCAGTCCTACAACCACAAGGAACTAATTCTGCCAACAAC
CTGCATGAGCAAGCAAAGGGGTTTTCCCCTAGAGCTTCCAGAAGGGAATGCCGCCCTGCC
ACCACCTTGGTTTTAGCCGGGAGAGATGATATCAGACTTCCAACCTGCAGTACTGTATGT
AGCATAGTAACTTAGTTTTAAGTTTCTACATTTATGGTGATTTGATACTTAAGCAATAGA
AAAACAATACTGAATGCCAAGCATGACTTAATTGTTTTTTTTTCTTTCTTTTTCTTTTTA
GGATCGATCCTATGGCATATGGAAATTCCCAGGCTAGGGGTTGAATTGGAGCTACAGCTG
CCGGCCTATGCCACAGCCACTGCAACGCAGGATCTGAGTTGCATCTGTAACCTACACCTC
AGCTCACAGCAATGCTGGCTCCTTAACTCACTGAAGGAGGCCAGGGATCAAACCTGTGTC
CTCATAGATACCGCTGAGCCATGATGGGAACTCCACGACTTAATATCTTATTGCAGTGGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               40-156, + strand, RNAz p=0.933177

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-156, + strand, RNAz p=0.933177

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-426, gnl|bosTau2|chr5 (34478579-34478987)
               

               
               1-426, gnl|Hg17|chr12 (56590990-56591418)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-426, gnl|bosTau2|chr5 (34478579-34478987)
               

               
               1-426, gnl|Hg17|chr12 (56590990-56591418)

	1-426, gnl\|bosTau2\|chr5 (34478579-34478987)
	1-426, gnl\|Hg17\|chr12 (56590990-56591418)