Non-Coding RNA Search

Ss1.1-Utr1-UTR010006E10.5

Sequence:


               
               TGGAATAAATAAATAAAATGTGATCTTAGCCTCATAACTTTATGATATACTTGGGAGGGA
GAAACACCCCAGCAATGTATGTGGCACCACCCCTGGCCCTTTACCCTGGATGAGCACTAT
GAGATATAATGCCAGTTAAGCCTTCTCCCCAAACAAATGCTCATCAGAAACGTGCCAAGT
TATATTGTGGGCTTCCCTTGGAGCACGTTTATGTACAGATGTTGTTGTGGTGATGGATTT
TGCTGCTGTTGTTGACGGCTGCTCCGAGTGGCCCTTCGGATTTTGACTCATTTCCTCAAG
TCTCCCCCAGCTGATTAAAGAAAGGACACCAGGAAATGAGCCGCGATGTCCTGAGCGGAA
TTCTTGAAGCTGGACTGCAGTGCGGGGACTCCCTCAAAGACAGTGGTCAAGGTTGCAGCA
GCATTTTCTCCCCGAAGAGTTTAGTTTATACAGCCGACAGGCTTGGGAAGGGCTTCATGT
TGCTGCATTCCTGTGTGGTAACTTTTTAAAAAAGAGATGAAGGACATTCGAGGAAATCTG
AAGCACGCAACATTGCACAGACAGTCTCTGTAACTTGAATCGATATTTTCATCCTCCACG
CAAAAGGAGGATGATTGCAAATCCAGAATAAGGAAGGGCTTGCAAGGGTTAGCTGAGGTA
AAAAGTTTGAATCTGGAGTTCCCGTCGAGGCGCAGTGGTTGACGAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGAATAAATAAATAAAATGTGATCTTAGCCTCATAACTTTATGATATACTTGGGAGGGA
GAAACACCCCAGCAATGTATGTGGCACCACCCCTGGCCCTTTACCCTGGATGAGCACTAT
GAGATATAATGCCAGTTAAGCCTTCTCCCCAAACAAATGCTCATCAGAAACGTGCCAAGT
TATATTGTGGGCTTCCCTTGGAGCACGTTTATGTACAGATGTTGTTGTGGTGATGGATTT
TGCTGCTGTTGTTGACGGCTGCTCCGAGTGGCCCTTCGGATTTTGACTCATTTCCTCAAG
TCTCCCCCAGCTGATTAAAGAAAGGACACCAGGAAATGAGCCGCGATGTCCTGAGCGGAA
TTCTTGAAGCTGGACTGCAGTGCGGGGACTCCCTCAAAGACAGTGGTCAAGGTTGCAGCA
GCATTTTCTCCCCGAAGAGTTTAGTTTATACAGCCGACAGGCTTGGGAAGGGCTTCATGT
TGCTGCATTCCTGTGTGGTAACTTTTTAAAAAAGAGATGAAGGACATTCGAGGAAATCTG
AAGCACGCAACATTGCACAGACAGTCTCTGTAACTTGAATCGATATTTTCATCCTCCACG
CAAAAGGAGGATGATTGCAAATCCAGAATAAGGAAGGGCTTGCAAGGGTTAGCTGAGGTA
AAAAGTTTGAATCTGGAGTTCCCGTCGAGGCGCAGTGGTTGACGAATC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               230-387, - strand, RNAz p=0.957409

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               230-387, - strand, RNAz p=0.957409

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-592, gnl|bosTau2|chr6 (36631538-36630966)
               

               
               7-592, gnl|Hg17|chr4 (55368242-55368818)
               

               
               7-592, gnl|Mm7|chr5 (74996318-74996847)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-592, gnl|bosTau2|chr6 (36631538-36630966)
               

               
               7-592, gnl|Hg17|chr4 (55368242-55368818)
               

               
               7-592, gnl|Mm7|chr5 (74996318-74996847)

	7-592, gnl\|bosTau2\|chr6 (36631538-36630966)
	7-592, gnl\|Hg17\|chr4 (55368242-55368818)
	7-592, gnl\|Mm7\|chr5 (74996318-74996847)