Non-Coding RNA Search

Ss1.1-Utr1-UTR010010H02.5

Sequence:


               
               GAATGGCATGGCTGCCCCCAGTTTCTCAGGCTCTGGGCACACGGCTAATGCTACAAGGAG
GTTCTGGCGGTTTCCCAGTATTCGCGCCGGACGCTAGGTTTGTTAGGTCCGCTGTCCTGG
GCTCCAGTCGCGCCGCAGGACTTGGGCTCTAAGAAGAATGGATCCTTTGGATACGTGGGA
CTTCTCCTCGCCTTTGATATCATTATGGATAAACAGGTTTTACATATATTTGGGCTTAGC
CTTTGGCTTTAGCCTTTGGATATGTTTCCAGATTGTTATCAGGAAGCAGGACAAGAACTC
ACAGGAAAAGACTGTTCAAAATGCATCACGGAATTTGATGACCAATGGCTCTCTCTCTCT
TGAAAGGAAGGAAGTCTTTGTGTCTGGAGTGAAGATTTTCTATGGTTCCCAGACTGGCAC
AGCAAAGGGGTTTGCAGCAATTCTGGCAGAAGCAGTGACCTCCCTTGACCTGCCTGTGGC
AGTGGTGGATCTGAAGGCATATGATCCGGACGATTATCTGCTAGAAGAGGTCACTAGTAA
GAGTGTCTGTGCCTTCCTGGTTGCCACCTACACGGATGGTCGCCCGACGGAGAGCGCAGA
GTGGTTCTGCAAGTGGCTGGAGGAGGCAGCCAGTGACTTTCGATTTGGCAAAACCTACCT
GAAGGGTATGCGATATGCCGTGTTTGGCCTGGGAAACTCCGCCTATGCCAGCCACTTCAA
CAAGGTGGGGAAGAACGTGGACAAGTGGCTGTGGATGCTGGGAGCTCATCGCGTGATGGC
CCGTGGGGAGGGTGACTGCGATGTGGTTAAAAGCAAACATGGCAGCATCGAGGCCGACTT
CACAGCTTGGAAGGCCAAGTTCATCTCCCGACTACAGGCACTCCGTCAGGGAGAGAGGAA
GCCCTGCAGTGGTAACTGCAGGAAAGGCAAGTGCGAGTCTCATCAGCGCGGCACAGGGCA
AGCGGAGCCAGGGCCCCAGGCTCAGGAGGGATTTCGTCGGAGAGATGCCGAGGAGGAGGA
GCTCCTTGGGAGCACCAGTGAGGAGGAGTCTGGCTCAGAGGACCAGCAGAGTGGCAGTTC
TGTCATTGACGTCGAAGACCTCGGCCAAGTGATGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATGGCATGGCTGCCCCCAGTTTCTCAGGCTCTGGGCACACGGCTAATGCTACAAGGAG
GTTCTGGCGGTTTCCCAGTATTCGCGCCGGACGCTAGGTTTGTTAGGTCCGCTGTCCTGG
GCTCCAGTCGCGCCGCAGGACTTGGGCTCTAAGAAGAATGGATCCTTTGGATACGTGGGA
CTTCTCCTCGCCTTTGATATCATTATGGATAAACAGGTTTTACATATATTTGGGCTTAGC
CTTTGGCTTTAGCCTTTGGATATGTTTCCAGATTGTTATCAGGAAGCAGGACAAGAACTC
ACAGGAAAAGACTGTTCAAAATGCATCACGGAATTTGATGACCAATGGCTCTCTCTCTCT
TGAAAGGAAGGAAGTCTTTGTGTCTGGAGTGAAGATTTTCTATGGTTCCCAGACTGGCAC
AGCAAAGGGGTTTGCAGCAATTCTGGCAGAAGCAGTGACCTCCCTTGACCTGCCTGTGGC
AGTGGTGGATCTGAAGGCATATGATCCGGACGATTATCTGCTAGAAGAGGTCACTAGTAA
GAGTGTCTGTGCCTTCCTGGTTGCCACCTACACGGATGGTCGCCCGACGGAGAGCGCAGA
GTGGTTCTGCAAGTGGCTGGAGGAGGCAGCCAGTGACTTTCGATTTGGCAAAACCTACCT
GAAGGGTATGCGATATGCCGTGTTTGGCCTGGGAAACTCCGCCTATGCCAGCCACTTCAA
CAAGGTGGGGAAGAACGTGGACAAGTGGCTGTGGATGCTGGGAGCTCATCGCGTGATGGC
CCGTGGGGAGGGTGACTGCGATGTGGTTAAAAGCAAACATGGCAGCATCGAGGCCGACTT
CACAGCTTGGAAGGCCAAGTTCATCTCCCGACTACAGGCACTCCGTCAGGGAGAGAGGAA
GCCCTGCAGTGGTAACTGCAGGAAAGGCAAGTGCGAGTCTCATCAGCGCGGCACAGGGCA
AGCGGAGCCAGGGCCCCAGGCTCAGGAGGGATTTCGTCGGAGAGATGCCGAGGAGGAGGA
GCTCCTTGGGAGCACCAGTGAGGAGGAGTCTGGCTCAGAGGACCAGCAGAGTGGCAGTTC
TGTCATTGACGTCGAAGACCTCGGCCAAGTGATGGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|30354665|gb|AAH51888.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|30354665|gb|AAH51888.1|

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               4-161, gnl|bosTau2|chr25 (24187711-24187554)
               

               
               4-161, gnl|Hg17|chr7 (65905977-65906119)
               

               
               4-161, gnl|Mm7|chr5 (129494832-129495016)
               


               
               165-290, gnl|bosTau2|chr25 (24186727-24186602)
               

               
               165-290, gnl|Hg17|chr7 (65907208-65907333)
               

               
               165-290, gnl|Mm7|chr5 (129496761-129496878)
               


               
               723-1030, gnl|bosTau2|chr25 (24178656-24178351)
               

               
               723-1030, gnl|Hg17|chr7 (65926988-65927296)
               

               
               723-1030, gnl|Mm7|chr5 (129506987-129507275)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-161, gnl|bosTau2|chr25 (24187711-24187554)
               

               
               4-161, gnl|Hg17|chr7 (65905977-65906119)
               

               
               4-161, gnl|Mm7|chr5 (129494832-129495016)
               


               
               165-290, gnl|bosTau2|chr25 (24186727-24186602)
               

               
               165-290, gnl|Hg17|chr7 (65907208-65907333)
               

               
               165-290, gnl|Mm7|chr5 (129496761-129496878)
               


               
               723-1030, gnl|bosTau2|chr25 (24178656-24178351)
               

               
               723-1030, gnl|Hg17|chr7 (65926988-65927296)
               

               
               723-1030, gnl|Mm7|chr5 (129506987-129507275)

	4-161, gnl\|bosTau2\|chr25 (24187711-24187554)
	4-161, gnl\|Hg17\|chr7 (65905977-65906119)
	4-161, gnl\|Mm7\|chr5 (129494832-129495016)

	165-290, gnl\|bosTau2\|chr25 (24186727-24186602)
	165-290, gnl\|Hg17\|chr7 (65907208-65907333)
	165-290, gnl\|Mm7\|chr5 (129496761-129496878)

	723-1030, gnl\|bosTau2\|chr25 (24178656-24178351)
	723-1030, gnl\|Hg17\|chr7 (65926988-65927296)
	723-1030, gnl\|Mm7\|chr5 (129506987-129507275)