Ss1.1-Utr1-UTR010011B07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTGATAGGTATGGCTACCATGTTACCAAAGGTACATATTTTATCTGCCATGATCAAGGC AATGTTAAAAAATTATTTGAAAACCTTAGAAACTACGATGGGAAGAATAATTATCCAAAA ACTTGTGGCAGATTTGAAATTTCTGGCATTAGGGATCTTACAACTGGCTATGATGATAGC CAACCTGATAAAAAAGCTGTAAGTAATGCTTTTACCAATTAAACTCTTCTGTATTTACTT TTTACTGTACTTTGTTCTGTTGGATTTTTTTTTATCTTTTCTAATGCCACACCCAAGGCA TATGGAGGTGCCAAGGCTAGGGGTCTAAGGAGCTGTAGCTGCTGGCCTATACCAGAGCCA CAGCAGCGGGGGATCTGAGCCATGTCTGTGACCTGCACCACAGCTCACGGCGACGCCAGA TCCTCGCACAGTGGGTTAAAGGTTCTGGTGTTGCCCCAGCTGCGGCTTGGATTCAGTCCG TGGCTGGGAACTTCCATGTGCTGCGGGTGTGGCCATTAAAAGAAAACAAAGCAGATGGTC GCTGACCAGTAGTGACCCATCCTGTGGCTCGTTCCCGTGTATAGTCTTCATGTGAACTAG AAAGTCCAGCCACCGTGGGCTCCATTGGCTGATCTTTCCTTAAAAACAGCTCCTTCTCTT CTTTCAGATCAAGAACAGCTTTTCATTCACAATGAGTCGTAGGTCAAACGCACTTCTGAC TTAGCCTTACGAAGTAGCCCTTGCTTTAAAGTATTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTGATAGGTATGGCTACCATGTTACCAAAGGTACATATTTTATCTGCCATGATCAAGGC AATGTTAAAAAATTATTTGAAAACCTTAGAAACTACGATGGGAAGAATAATTATCCAAAA ACTTGTGGCAGATTTGAAATTTCTGGCATTAGGGATCTTACAACTGGCTATGATGATAGC CAACCTGATAAAAAAGCTGTAAGTAATGCTTTTACCAATTAAACTCTTCTGTATTTACTT TTTACTGTACTTTGTTCTGTTGGATTTTTTTTTATCTTTTCTAATGCCACACCCAAGGCA TATGGAGGTGCCAAGGCTAGGGGTCTAAGGAGCTGTAGCTGCTGGCCTATACCAGAGCCA CAGCAGCGGGGGATCTGAGCCATGTCTGTGACCTGCACCACAGCTCACGGCGACGCCAGA TCCTCGCACAGTGGGTTAAAGGTTCTGGTGTTGCCCCAGCTGCGGCTTGGATTCAGTCCG TGGCTGGGAACTTCCATGTGCTGCGGGTGTGGCCATTAAAAGAAAACAAAGCAGATGGTC GCTGACCAGTAGTGACCCATCCTGTGGCTCGTTCCCGTGTATAGTCTTCATGTGAACTAG AAAGTCCAGCCACCGTGGGCTCCATTGGCTGATCTTTCCTTAAAAACAGCTCCTTCTCTT CTTTCAGATCAAGAACAGCTTTTCATTCACAATGAGTCGTAGGTCAAACGCACTTCTGAC TTAGCCTTACGAAGTAGCCCTTGCTTTAAAGTATTA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 98-213, + strand, RNAz p=0.726331 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 98-213, + strand, RNAz p=0.726331 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-254, gnl|bosTau2|chr6 (29648126-29647871) | |
| 1-254, gnl|canFam2|chr3 (77183672-77183464) | |
| 1-254, gnl|danRer3|chr15 (7902045-7902265) | |
| 1-254, gnl|dasNov1|scaffold_65015 (5681-5473) | |
| 1-254, gnl|echTel1|scaffold_286228 (15430-15222) | |
| 1-254, gnl|fr1|chrUn (236896703-236896905) | |
| 1-254, gnl|galGal2|chrUn (150081683-150081890) | |
| 1-254, gnl|hg17|chr4 (37674360-37674569) | |
| 1-254, gnl|Hg17|chr4 (37674364-37674620) | |
| 1-254, gnl|loxAfr1|scaffold_3139 (20159-20367) | |
| 1-254, gnl|mm7|chr5 (63465896-63466104) | |
| 1-254, gnl|Mm7|chr5 (63465898-63466155) | |
| 1-254, gnl|monDom2|scaffold_26 (2701307-2701514) | |
| 1-254, gnl|oryCun1|scaffold_186875 (8556-8764) | |
| 1-254, gnl|panTro1|chr3 (40340558-40340767) | |
| 1-254, gnl|rheMac2|chr5 (32827898-32828107) | |
| 1-254, gnl|rn3|chr14 (46849235-46849027) | |
| 1-254, gnl|tetNig1|chrUn_random (51165209-51165412) | |
| 1-254, gnl|xenTro1|scaffold_152 (740305-740512) | |
| 551-756, gnl|bosTau2|chr19 (23888732-23888946) | |
| 551-756, gnl|Hg17|chr17 (15990873-15990647) | |
| 551-756, gnl|Mm7|chr11 (62480278-62480055) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-254, gnl|bosTau2|chr6 (29648126-29647871) | |
| 1-254, gnl|canFam2|chr3 (77183672-77183464) | |
| 1-254, gnl|danRer3|chr15 (7902045-7902265) | |
| 1-254, gnl|dasNov1|scaffold_65015 (5681-5473) | |
| 1-254, gnl|echTel1|scaffold_286228 (15430-15222) | |
| 1-254, gnl|fr1|chrUn (236896703-236896905) | |
| 1-254, gnl|galGal2|chrUn (150081683-150081890) | |
| 1-254, gnl|hg17|chr4 (37674360-37674569) | |
| 1-254, gnl|Hg17|chr4 (37674364-37674620) | |
| 1-254, gnl|loxAfr1|scaffold_3139 (20159-20367) | |
| 1-254, gnl|mm7|chr5 (63465896-63466104) | |
| 1-254, gnl|Mm7|chr5 (63465898-63466155) | |
| 1-254, gnl|monDom2|scaffold_26 (2701307-2701514) | |
| 1-254, gnl|oryCun1|scaffold_186875 (8556-8764) | |
| 1-254, gnl|panTro1|chr3 (40340558-40340767) | |
| 1-254, gnl|rheMac2|chr5 (32827898-32828107) | |
| 1-254, gnl|rn3|chr14 (46849235-46849027) | |
| 1-254, gnl|tetNig1|chrUn_random (51165209-51165412) | |
| 1-254, gnl|xenTro1|scaffold_152 (740305-740512) | |
| 551-756, gnl|bosTau2|chr19 (23888732-23888946) | |
| 551-756, gnl|Hg17|chr17 (15990873-15990647) | |
| 551-756, gnl|Mm7|chr11 (62480278-62480055) |