Non-Coding RNA Search

Ss1.1-Utr1-UTR010022G09.5

Sequence:


               
               AGCTTCTCCCCAGACCCGGAGGCTGAGGATCATGGGGCCTGGAGCCCTCTTCCTGCTGCT
GTCGGGAACCCTGGCCCTGACCGGGACCCAGGCGGGTCCCCACTCCCTGAGGTATTTCCA
CACCGCCGTGTCCCGGCCCGACCTCGGGAAGCCCCGTTTCATCGCCGTCGGCTACGTGGA
CGACACGCAGTTCGTGCGGTTCGACAGCGACGCCCCGAATCCGCGGATGGAGTCTCGGGT
GCCGTGGATACAGCAGGAGGGGCAGGAGTATTGGGATGAGGAGACGCGGAAACAAAGGGA
CACCTCACAGACTTTCCGAGTGAGCCTGAACACCCTGCGCGGCTACTACAACCAGAGCGA
GGCCGGGTCTCACACCATCCAGGTCATGTACGGCTGCTACTTGGGACCAGACGGGCTCCT
CCTCCACGGGTACCATCAGTACGCCTACGACGGCGCCGATTACCTCGCCCTGAACGAGGA
CCTGCGCTCCTGGACCGCGGCGGACACGGCGGCTCAGATCACCAAGCGCAAGTGGGAGGC
GGCCGATGTGACAGAGCGTAGGAGGAGCTACCTGGAGGGCGCCTGTGTGGAGTGGCTCCA
GAAATACCTGGAGATGGGGGAGGACACGCTGCAGCGCTCAGAGCCTCCAAAGACACATGT
GACCCGCCACCCCAGCTCTGACCTCGGGGTCACCTTGAGGTGCTGGGCCCTGGGCTTCTA
CCCTAAGGAGATCTCCCTGACCTGGCAGCGGGAGGGCCAGGACCAGAGCCAGGACATGGA
GCTGGTGGAGACCAGGCCCTCAGGGGATGGGACCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTTCTCCCCAGACCCGGAGGCTGAGGATCATGGGGCCTGGAGCCCTCTTCCTGCTGCT
GTCGGGAACCCTGGCCCTGACCGGGACCCAGGCGGGTCCCCACTCCCTGAGGTATTTCCA
CACCGCCGTGTCCCGGCCCGACCTCGGGAAGCCCCGTTTCATCGCCGTCGGCTACGTGGA
CGACACGCAGTTCGTGCGGTTCGACAGCGACGCCCCGAATCCGCGGATGGAGTCTCGGGT
GCCGTGGATACAGCAGGAGGGGCAGGAGTATTGGGATGAGGAGACGCGGAAACAAAGGGA
CACCTCACAGACTTTCCGAGTGAGCCTGAACACCCTGCGCGGCTACTACAACCAGAGCGA
GGCCGGGTCTCACACCATCCAGGTCATGTACGGCTGCTACTTGGGACCAGACGGGCTCCT
CCTCCACGGGTACCATCAGTACGCCTACGACGGCGCCGATTACCTCGCCCTGAACGAGGA
CCTGCGCTCCTGGACCGCGGCGGACACGGCGGCTCAGATCACCAAGCGCAAGTGGGAGGC
GGCCGATGTGACAGAGCGTAGGAGGAGCTACCTGGAGGGCGCCTGTGTGGAGTGGCTCCA
GAAATACCTGGAGATGGGGGAGGACACGCTGCAGCGCTCAGAGCCTCCAAAGACACATGT
GACCCGCCACCCCAGCTCTGACCTCGGGGTCACCTTGAGGTGCTGGGCCCTGGGCTTCTA
CCCTAAGGAGATCTCCCTGACCTGGCAGCGGGAGGGCCAGGACCAGAGCCAGGACATGGA
GCTGGTGGAGACCAGGCCCTCAGGGGATGGGACCTT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|21586006|gb|AAM55499.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|21586006|gb|AAM55499.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               94-366, gnl|bosTau2|chr23 (23096967-23096696)
               

               
               94-366, gnl|Hg17|chr6 (29903802-29904073)
               

               
               94-366, gnl|Mm7|chr17 (34516576-34516305)
               


               
               399-649, gnl|bosTau2|chr20 (36655627-36655873)
               

               
               399-649, gnl|Hg17|chr6 (31347071-31346829)
               

               
               399-649, gnl|Mm7|chr17 (32077846-32077606)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               94-366, gnl|bosTau2|chr23 (23096967-23096696)
               

               
               94-366, gnl|Hg17|chr6 (29903802-29904073)
               

               
               94-366, gnl|Mm7|chr17 (34516576-34516305)
               


               
               399-649, gnl|bosTau2|chr20 (36655627-36655873)
               

               
               399-649, gnl|Hg17|chr6 (31347071-31346829)
               

               
               399-649, gnl|Mm7|chr17 (32077846-32077606)

	94-366, gnl\|bosTau2\|chr23 (23096967-23096696)
	94-366, gnl\|Hg17\|chr6 (29903802-29904073)
	94-366, gnl\|Mm7\|chr17 (34516576-34516305)

	399-649, gnl\|bosTau2\|chr20 (36655627-36655873)
	399-649, gnl\|Hg17\|chr6 (31347071-31346829)
	399-649, gnl\|Mm7\|chr17 (32077846-32077606)