Non-Coding RNA Search

Ss1.1-Utr1-UTR010022G10.5

Sequence:


               
               ACAAATGGTCAGGCGGCGGCGGCGGAGAAGGAGGCGGAGGCGCTGGGGGGAGCCGAGGCC
GCTGGGCTGCCGAGAGTTGCGCGCTCTGCCCGGCCGCCGCCACTAGCGCGGCGCCGCCAG
CCGGGAGCCAGCTAGCCGAGGGCCAGGAAGGCGGGACGCGACCCCTGCGCGCCCGAGCCA
CCAGGGCTCTCCCCACTGCCCGCGCTTCATGAATCGCAAGTTTCCGCGGCGGCGGCGGCT
GCGGGACGTGGAGCGGGAGCCGGCGGAGCGGGCCGAGCGCAGCTCGGGCTCGACGGAGGG
CACCGGAGGGGAGGAGATCGCCCCGGCCGCAGAGGGAGCAGCCGCTCTCCGCGCCACCGC
CAGCCCCAGCCGAGCGGCGCCAAGAAAGGAGCCGAGAAAGTATGGCTGAGGAGGAGGCGC
CTAAGAAGTCCCCGGCCGCCCCCGGCGGCGCGAGCTGGGAACTTTGTTCCGCGGCGCTCC
GTACGGGACCGGGGGCAGAAGGGAGCGGGTACGCGGGCAGCCTCCGCCGCCCCCCGGCTG
ACTCCGGACGCTTGGCGCTCCGGCTGCTCCTACTGCTTTGGCTGCTGGAGGCTCCGCTGC
TGCTGGGGGTCCGAGCGCAGGCAGCCGGCCAGGGGCCCGGGCCGGGGCAGCAGCCCCCGC
CGCCTCAGCAGCAACAGAGCGGGCAGCAGTACAACGGCGAGAGGGGCATCTCTATACCGG
ACCACGGCTACTGCCAGCCCATCTCCATCCCGCTGTGCACGGACATCGCGTACAACCAAA
CCATCATGCCCAACCTGCTGGGCCACACGAATCAGGAGGATGCGGGCCTCGAGGTGCACC
AGTTCTACCCGCTGGTGAAGGTGAGTGCTCTGCAGAGCTTAAGTTTTCCTGTGCTCCATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAAATGGTCAGGCGGCGGCGGCGGAGAAGGAGGCGGAGGCGCTGGGGGGAGCCGAGGCC
GCTGGGCTGCCGAGAGTTGCGCGCTCTGCCCGGCCGCCGCCACTAGCGCGGCGCCGCCAG
CCGGGAGCCAGCTAGCCGAGGGCCAGGAAGGCGGGACGCGACCCCTGCGCGCCCGAGCCA
CCAGGGCTCTCCCCACTGCCCGCGCTTCATGAATCGCAAGTTTCCGCGGCGGCGGCGGCT
GCGGGACGTGGAGCGGGAGCCGGCGGAGCGGGCCGAGCGCAGCTCGGGCTCGACGGAGGG
CACCGGAGGGGAGGAGATCGCCCCGGCCGCAGAGGGAGCAGCCGCTCTCCGCGCCACCGC
CAGCCCCAGCCGAGCGGCGCCAAGAAAGGAGCCGAGAAAGTATGGCTGAGGAGGAGGCGC
CTAAGAAGTCCCCGGCCGCCCCCGGCGGCGCGAGCTGGGAACTTTGTTCCGCGGCGCTCC
GTACGGGACCGGGGGCAGAAGGGAGCGGGTACGCGGGCAGCCTCCGCCGCCCCCCGGCTG
ACTCCGGACGCTTGGCGCTCCGGCTGCTCCTACTGCTTTGGCTGCTGGAGGCTCCGCTGC
TGCTGGGGGTCCGAGCGCAGGCAGCCGGCCAGGGGCCCGGGCCGGGGCAGCAGCCCCCGC
CGCCTCAGCAGCAACAGAGCGGGCAGCAGTACAACGGCGAGAGGGGCATCTCTATACCGG
ACCACGGCTACTGCCAGCCCATCTCCATCCCGCTGTGCACGGACATCGCGTACAACCAAA
CCATCATGCCCAACCTGCTGGGCCACACGAATCAGGAGGATGCGGGCCTCGAGGTGCACC
AGTTCTACCCGCTGGTGAAGGTGAGTGCTCTGCAGAGCTTAAGTTTTCCTGTGCTCCATG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               679-798, - strand, RNAz p=0.709237

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               679-798, - strand, RNAz p=0.709237

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               617-900, gnl|bosTau2|chr19 (37706185-37705899)
               

               
               617-900, gnl|Hg17|chr17 (39990581-39990867)
               

               
               617-900, gnl|Mm7|chr11 (102713771-102714072)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               617-900, gnl|bosTau2|chr19 (37706185-37705899)
               

               
               617-900, gnl|Hg17|chr17 (39990581-39990867)
               

               
               617-900, gnl|Mm7|chr11 (102713771-102714072)

	617-900, gnl\|bosTau2\|chr19 (37706185-37705899)
	617-900, gnl\|Hg17\|chr17 (39990581-39990867)
	617-900, gnl\|Mm7\|chr11 (102713771-102714072)