Non-Coding RNA Search

Ss1.1-Utr1-UTR010025B05.5

Sequence:


               
               CTCACGGCAACGCCGGATCCTTAACCCACTGAGCAAGGGCAGGGACCGAACCCGCAACCT
CATGGTTCCTAGTCGGATTCGTTAACCTCTGCACCACGACGGGAACTCCAGAACTCAGAT
ATTTCTGATAGAGAAAAATGTCTTTTTTTCTTTTCTTTTCTTTCAAGGATTAAAGGTAGC
TGGCCAGCCTTTCCTAATTTTTAGTTGGAACTTCACAGCAAGGCCAGAGTTGCTCTTAGG
TTTTCCCAGTATGGCTAGAGTAGGGCAATTATTTCAGAAGCTCGAGCTAATGCAGAGAAG
AGATCTGTCAGCTAGCTACATTCTATTAACCCTAGGTCAATATGGTGAAAATGTAACCAT
TCAGCAACTTCTTCACCTGGAGCCCATTCCCAATCTAAAGGGAAGTCCAGAAATTGTATG
CACATTTTGCTAAGGAAAGGCTTTCATTAGTTTGTCTCAGGGCTTATAACTAAAAAAAGG
CGATCTTTTAGGGCTGTACACACATTTTCTCTGGTACACGGTTGTGCCTTTATAGAAAAG
GTACCTTCCAGGGTGAAACATTTCTATTCCTTCAAGTACCCGAGAGCTTATGGATGAGGG
TTTAAGGGGAATCCAAGTGTCCACCCCACGTGTTACGTCTCACAACAGCACAGGCCTCAA
ACTATACATATGTCCAAAGGGACTGCTTTTGCATTCACCCCCTTGGAGGTGCTGCGTGTA
AAAGCCACGGTAGTCTGGAGTGCTTGAGTCCAGTCCCAACCAGGCCACTAACTGGCTGAG
TAACCTTGGACAAGTCGCATACCCTCTCTGGCCTTCAGTTTCCACATCTGCAAACTGGAA
GTTGAACGGCATGGTCTTCAAGGTCCTTCCCAACCAAGAGTCTGGTACCAAGTAGGCCTA
GCCATTAAAGCAGCTTCCTGTGGGTGCGGTGCAGTTTTAACGGTCCCCCCTCCCCCGCTC
GAGCCCGCGAAACCCTCTTTAACACGCCCCTCCGAGTGACGGCGCTTCCCAACCTCAACC
CGGACACGGCTCCGCCCCTTCCCGGGGGCGTCCCATCGTGCCCCGCGCTGGGCTTCTAAA
GCAGTGGGGCACCTCCCGCCTTTCCGCGGCCCCGACCCCGAACTCTTCTCCCCAGTTCTC
CCTGGTGCCCTATCCTATCAACGTCTAATAGCCCAGCCAATCACGCGGGCCTACAGTCTT
ACCTTCGGTCCACCCTCCTCTCGGCGCCCAGCCGGCCTGAGCTGAAGGCCTTTACCAGGC
CAACCCAATCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCACGGCAACGCCGGATCCTTAACCCACTGAGCAAGGGCAGGGACCGAACCCGCAACCT
CATGGTTCCTAGTCGGATTCGTTAACCTCTGCACCACGACGGGAACTCCAGAACTCAGAT
ATTTCTGATAGAGAAAAATGTCTTTTTTTCTTTTCTTTTCTTTCAAGGATTAAAGGTAGC
TGGCCAGCCTTTCCTAATTTTTAGTTGGAACTTCACAGCAAGGCCAGAGTTGCTCTTAGG
TTTTCCCAGTATGGCTAGAGTAGGGCAATTATTTCAGAAGCTCGAGCTAATGCAGAGAAG
AGATCTGTCAGCTAGCTACATTCTATTAACCCTAGGTCAATATGGTGAAAATGTAACCAT
TCAGCAACTTCTTCACCTGGAGCCCATTCCCAATCTAAAGGGAAGTCCAGAAATTGTATG
CACATTTTGCTAAGGAAAGGCTTTCATTAGTTTGTCTCAGGGCTTATAACTAAAAAAAGG
CGATCTTTTAGGGCTGTACACACATTTTCTCTGGTACACGGTTGTGCCTTTATAGAAAAG
GTACCTTCCAGGGTGAAACATTTCTATTCCTTCAAGTACCCGAGAGCTTATGGATGAGGG
TTTAAGGGGAATCCAAGTGTCCACCCCACGTGTTACGTCTCACAACAGCACAGGCCTCAA
ACTATACATATGTCCAAAGGGACTGCTTTTGCATTCACCCCCTTGGAGGTGCTGCGTGTA
AAAGCCACGGTAGTCTGGAGTGCTTGAGTCCAGTCCCAACCAGGCCACTAACTGGCTGAG
TAACCTTGGACAAGTCGCATACCCTCTCTGGCCTTCAGTTTCCACATCTGCAAACTGGAA
GTTGAACGGCATGGTCTTCAAGGTCCTTCCCAACCAAGAGTCTGGTACCAAGTAGGCCTA
GCCATTAAAGCAGCTTCCTGTGGGTGCGGTGCAGTTTTAACGGTCCCCCCTCCCCCGCTC
GAGCCCGCGAAACCCTCTTTAACACGCCCCTCCGAGTGACGGCGCTTCCCAACCTCAACC
CGGACACGGCTCCGCCCCTTCCCGGGGGCGTCCCATCGTGCCCCGCGCTGGGCTTCTAAA
GCAGTGGGGCACCTCCCGCCTTTCCGCGGCCCCGACCCCGAACTCTTCTCCCCAGTTCTC
CCTGGTGCCCTATCCTATCAACGTCTAATAGCCCAGCCAATCACGCGGGCCTACAGTCTT
ACCTTCGGTCCACCCTCCTCTCGGCGCCCAGCCGGCCTGAGCTGAAGGCCTTTACCAGGC
CAACCCAATCAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1020-1131, - strand, RNAz p=0.518891

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1020-1131, - strand, RNAz p=0.518891

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               192-1272, gnl|bosTau2|chr19 (32604094-32603000)
               

               
               192-1272, gnl|Hg17|chr17 (43080143-43082031)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               192-1272, gnl|bosTau2|chr19 (32604094-32603000)
               

               
               192-1272, gnl|Hg17|chr17 (43080143-43082031)

	192-1272, gnl\|bosTau2\|chr19 (32604094-32603000)
	192-1272, gnl\|Hg17\|chr17 (43080143-43082031)