Ss1.1-Utr1-UTR010029A07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCCAAGCAGCCGCGCTCCTCCGCCCGCCTAGCAGCTTCCCGCCGCCGCCTGAGGGCAT CCGGTTAAGGCTGCCAGGGGACCCAGCTGTGTGCGGATGGATGGGACAGAGGCCCGACAG CGGAAGCCAGAGGAGCTGGGGCTGCCACATGTCCTCAGCACCGGAAGACCCCCTATAGTC TCAGAAGATGGACTGCTTAGTGTCCCCGAGAGCGAGAGAGTGGCCCCTAAACCACTGGGG CTGGAGGTCAGCAGGGAGACTGCCTTGTCCATCGGCCTTCAGGTGGCACTGCCTTTCGTG TTCGCAGGCCTCGGGCTGTCCGGGGCAGGCCTTCTTTTGGACTATTTCCAGCGCTGGCCC GTGTTCTCGGAGCTCAAGGACCTGCTGACCTTAGTGCCGCCCCTAGTGGGCCTGAAGGGC AACCTGGAGATGACGCTGGCCTCCCGGCTCTCCACGGCGGCCAACACTGGACAGATGGAT GACCCCCGGGAGCAGCACAGAACCATCAGCAGTAACCTCGCCCTCACTCAGGTGCAGGCC ACTGTCGTGGGGCTCCTGGCCGCCGTGGCTGCCCTCCTGCTGGGCGCCGTGTCTAGGCAG GAGCTGGACCTGGTGAAGGCAGAGGTGCTGTGTGCCAGCAGCGTCATCACCGCCTTCCTG GCAGCCTTCGCCCTGGGGATGCTGATGGTCTGCATCGTGATTGGTGCTCGGAGGCTCGGG ATCAACCCAGACAACATCGCCACGCCCATCGCAGCCAGCCTGGGAGACCTCATCACCTTG TCCCTCCTGGCTTTCGTCAGCAGCTTCTTCTACAAGCACAGAGACAGTCGGTACCTGACG CTGCTGGTCTGCGTGGGCTTCGTGGCCCTGACACCCGTGTGGGTGCTCGTCGCCAAGCAG AACCCGCCTGTCGTGAAGATCCTGAAGTTTGGGTGGCTCCCGATCGTCCTGGCGATGGTC CTTAGCAGCTTCGGAGGGCTCATCCTGAACAAGACCGTTTCTAAGCTGCAGTTCAAAGGC ATGGCTGTGTTTGCTCCCATCATATGTGGTGTTGGTGGCAATCTGGTGGCCATTCAGACC AGCCGGGTCTCCACCTACCTGCACATGTGGAGTACGCCTGGCGTCCTGCCCCTGTGGATG AAAGCATTCTGGCCCAACCCATGCTCAACGTTCTGCAGCTCTGAAATCAACTCCACGTCA GCCCGAGTCCTGCTCTTCCTGGTGGTCCCAGGCCATCTGATCTTCTTCTACATCATTTAC CTGGTGGAAGGCCAGTCCGTGCCAAACGACAGAAGCTTTGTGGTGCTCTACTTGCTGGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCCAAGCAGCCGCGCTCCTCCGCCCGCCTAGCAGCTTCCCGCCGCCGCCTGAGGGCAT CCGGTTAAGGCTGCCAGGGGACCCAGCTGTGTGCGGATGGATGGGACAGAGGCCCGACAG CGGAAGCCAGAGGAGCTGGGGCTGCCACATGTCCTCAGCACCGGAAGACCCCCTATAGTC TCAGAAGATGGACTGCTTAGTGTCCCCGAGAGCGAGAGAGTGGCCCCTAAACCACTGGGG CTGGAGGTCAGCAGGGAGACTGCCTTGTCCATCGGCCTTCAGGTGGCACTGCCTTTCGTG TTCGCAGGCCTCGGGCTGTCCGGGGCAGGCCTTCTTTTGGACTATTTCCAGCGCTGGCCC GTGTTCTCGGAGCTCAAGGACCTGCTGACCTTAGTGCCGCCCCTAGTGGGCCTGAAGGGC AACCTGGAGATGACGCTGGCCTCCCGGCTCTCCACGGCGGCCAACACTGGACAGATGGAT GACCCCCGGGAGCAGCACAGAACCATCAGCAGTAACCTCGCCCTCACTCAGGTGCAGGCC ACTGTCGTGGGGCTCCTGGCCGCCGTGGCTGCCCTCCTGCTGGGCGCCGTGTCTAGGCAG GAGCTGGACCTGGTGAAGGCAGAGGTGCTGTGTGCCAGCAGCGTCATCACCGCCTTCCTG GCAGCCTTCGCCCTGGGGATGCTGATGGTCTGCATCGTGATTGGTGCTCGGAGGCTCGGG ATCAACCCAGACAACATCGCCACGCCCATCGCAGCCAGCCTGGGAGACCTCATCACCTTG TCCCTCCTGGCTTTCGTCAGCAGCTTCTTCTACAAGCACAGAGACAGTCGGTACCTGACG CTGCTGGTCTGCGTGGGCTTCGTGGCCCTGACACCCGTGTGGGTGCTCGTCGCCAAGCAG AACCCGCCTGTCGTGAAGATCCTGAAGTTTGGGTGGCTCCCGATCGTCCTGGCGATGGTC CTTAGCAGCTTCGGAGGGCTCATCCTGAACAAGACCGTTTCTAAGCTGCAGTTCAAAGGC ATGGCTGTGTTTGCTCCCATCATATGTGGTGTTGGTGGCAATCTGGTGGCCATTCAGACC AGCCGGGTCTCCACCTACCTGCACATGTGGAGTACGCCTGGCGTCCTGCCCCTGTGGATG AAAGCATTCTGGCCCAACCCATGCTCAACGTTCTGCAGCTCTGAAATCAACTCCACGTCA GCCCGAGTCCTGCTCTTCCTGGTGGTCCCAGGCCATCTGATCTTCTTCTACATCATTTAC CTGGTGGAAGGCCAGTCCGTGCCAAACGACAGAAGCTTTGTGGTGCTCTACTTGCTGGCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 68 entry(ies) | More info |
| Aligned organism(s): 68 entry(ies) | Help | Less info |
| 349-460, gnl|bosTau2|chr7 (16822249-16822360) | |
| 349-460, gnl|canFam2|chr20 (3220595-3220728) | |
| 349-460, gnl|danRer3|chr23 (51857224-51857091) | |
| 349-460, gnl|dasNov1|scaffold_47347 (7328-7463) | |
| 349-460, gnl|echTel1|scaffold_273637 (932-1066) | |
| 349-460, gnl|fr1|chrUn (245643112-245642981) | |
| 349-460, gnl|galGal2|chr12 (10539898-10540029) | |
| 349-460, gnl|hg17|chr3 (127252478-127252613) | |
| 349-460, gnl|Hg17|chr3 (127252594-127252483) | |
| 349-460, gnl|loxAfr1|scaffold_60207 (957-1091) | |
| 349-460, gnl|mm7|chr6 (90703611-90703477) | |
| 349-460, gnl|Mm7|chr6 (90703494-90703605) | |
| 349-460, gnl|monDom2|scaffold_5 (44213247-44213112) | |
| 349-460, gnl|oryCun1|scaffold_110029 (18781-18915) | |
| 349-460, gnl|panTro1|chr2 (129101075-129101210) | |
| 349-460, gnl|rheMac2|chr2 (45832832-45832967) | |
| 349-460, gnl|rn3|chr7 (22607799-22607683) | |
| 349-460, gnl|tetNig1|chrUn_random (48682648-48682517) | |
| 521-677, gnl|bosTau2|chr7 (16825086-16825242) | |
| 521-677, gnl|canFam2|chr20 (3195123-3195291) | |
| 521-677, gnl|danRer3|chrUn (17897875-17898042) | |
| 521-677, gnl|dasNov1|scaffold_213038 (609-441) | |
| 521-677, gnl|echTel1|scaffold_185629 (2539-2707) | |
| 521-677, gnl|fr1|chrUn (245644328-245644153) | |
| 521-677, gnl|hg17|chr3 (127227872-127228039) | |
| 521-677, gnl|Hg17|chr3 (127228032-127227875) | |
| 521-677, gnl|mm7|chr6 (90712446-90712278) | |
| 521-677, gnl|Mm7|chr6 (90712283-90712441) | |
| 521-677, gnl|oryCun1|scaffold_110029 (13520-13687) | |
| 521-677, gnl|panTro1|chr2 (129076439-129076606) | |
| 521-677, gnl|rheMac2|chr2 (45808426-45808593) | |
| 521-677, gnl|rn3|chr7 (22618631-22618480) | |
| 521-677, gnl|tetNig1|chrUn_random (48684002-48683841) | |
| 822-973, gnl|bosTau2|chr7 (16826018-16826169) | |
| 822-973, gnl|canFam2|chr20 (3190481-3190665) | |
| 822-973, gnl|danRer3|chrUn (17892102-17892241) | |
| 822-973, gnl|dasNov1|scaffold_20275 (11811-12001) | |
| 822-973, gnl|echTel1|scaffold_183705 (4209-4378) | |
| 822-973, gnl|fr1|chrUn (245645966-245645797) | |
| 822-973, gnl|hg17|chr3 (127218265-127218453) | |
| 822-973, gnl|Hg17|chr3 (127218418-127218267) | |
| 822-973, gnl|loxAfr1|scaffold_25051 (16294-16461) | |
| 822-973, gnl|mm7|chr6 (90715695-90715510) | |
| 822-973, gnl|Mm7|chr6 (90715540-90715691) | |
| 822-973, gnl|oryCun1|scaffold_110029 (9163-9348) | |
| 822-973, gnl|panTro1|chr2 (129066786-129066974) | |
| 822-973, gnl|rheMac2|chr2 (45799154-45799342) | |
| 822-973, gnl|tetNig1|chrUn_random (48686240-48686114) | |
| 822-973, gnl|xenTro1|scaffold_368 (9033-8858) | |
| 1048-1181, gnl|bosTau2|chr7 (16827560-16827693) | |
| 1048-1181, gnl|Hg17|chr3 (127214291-127214158) | |
| 1048-1181, gnl|Mm7|chr6 (90720895-90721028) | |
| 1183-1319, gnl|bosTau2|chr7 (16828706-16828842) | |
| 1183-1319, gnl|canFam2|chr20 (3176085-3176246) | |
| 1183-1319, gnl|danRer3|chrUn (17877419-17877580) | |
| 1183-1319, gnl|echTel1|scaffold_58886 (2221-2381) | |
| 1183-1319, gnl|fr1|chrUn (245650727-245650567) | |
| 1183-1319, gnl|hg17|chr3 (127210269-127210430) | |
| 1183-1319, gnl|Hg17|chr3 (127210422-127210286) | |
| 1183-1319, gnl|loxAfr1|scaffold_57561 (5087-5248) | |
| 1183-1319, gnl|mm7|chr6 (90722924-90722765) | |
| 1183-1319, gnl|Mm7|chr6 (90722769-90722905) | |
| 1183-1319, gnl|oryCun1|scaffold_110029 (3823-3983) | |
| 1183-1319, gnl|panTro1|chr2 (129058779-129058940) | |
| 1183-1319, gnl|rheMac2|chr2 (45790863-45791024) | |
| 1183-1319, gnl|rn3|chr7 (22663792-22663631) | |
| 1183-1319, gnl|tetNig1|chrUn_random (48692573-48692412) | |
| 1183-1319, gnl|xenTro1|scaffold_368 (14060-13900) |
| Aligned organism(s): 68 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 349-460, gnl|bosTau2|chr7 (16822249-16822360) | |
| 349-460, gnl|canFam2|chr20 (3220595-3220728) | |
| 349-460, gnl|danRer3|chr23 (51857224-51857091) | |
| 349-460, gnl|dasNov1|scaffold_47347 (7328-7463) | |
| 349-460, gnl|echTel1|scaffold_273637 (932-1066) | |
| 349-460, gnl|fr1|chrUn (245643112-245642981) | |
| 349-460, gnl|galGal2|chr12 (10539898-10540029) | |
| 349-460, gnl|hg17|chr3 (127252478-127252613) | |
| 349-460, gnl|Hg17|chr3 (127252594-127252483) | |
| 349-460, gnl|loxAfr1|scaffold_60207 (957-1091) | |
| 349-460, gnl|mm7|chr6 (90703611-90703477) | |
| 349-460, gnl|Mm7|chr6 (90703494-90703605) | |
| 349-460, gnl|monDom2|scaffold_5 (44213247-44213112) | |
| 349-460, gnl|oryCun1|scaffold_110029 (18781-18915) | |
| 349-460, gnl|panTro1|chr2 (129101075-129101210) | |
| 349-460, gnl|rheMac2|chr2 (45832832-45832967) | |
| 349-460, gnl|rn3|chr7 (22607799-22607683) | |
| 349-460, gnl|tetNig1|chrUn_random (48682648-48682517) | |
| 521-677, gnl|bosTau2|chr7 (16825086-16825242) | |
| 521-677, gnl|canFam2|chr20 (3195123-3195291) | |
| 521-677, gnl|danRer3|chrUn (17897875-17898042) | |
| 521-677, gnl|dasNov1|scaffold_213038 (609-441) | |
| 521-677, gnl|echTel1|scaffold_185629 (2539-2707) | |
| 521-677, gnl|fr1|chrUn (245644328-245644153) | |
| 521-677, gnl|hg17|chr3 (127227872-127228039) | |
| 521-677, gnl|Hg17|chr3 (127228032-127227875) | |
| 521-677, gnl|mm7|chr6 (90712446-90712278) | |
| 521-677, gnl|Mm7|chr6 (90712283-90712441) | |
| 521-677, gnl|oryCun1|scaffold_110029 (13520-13687) | |
| 521-677, gnl|panTro1|chr2 (129076439-129076606) | |
| 521-677, gnl|rheMac2|chr2 (45808426-45808593) | |
| 521-677, gnl|rn3|chr7 (22618631-22618480) | |
| 521-677, gnl|tetNig1|chrUn_random (48684002-48683841) | |
| 822-973, gnl|bosTau2|chr7 (16826018-16826169) | |
| 822-973, gnl|canFam2|chr20 (3190481-3190665) | |
| 822-973, gnl|danRer3|chrUn (17892102-17892241) | |
| 822-973, gnl|dasNov1|scaffold_20275 (11811-12001) | |
| 822-973, gnl|echTel1|scaffold_183705 (4209-4378) | |
| 822-973, gnl|fr1|chrUn (245645966-245645797) | |
| 822-973, gnl|hg17|chr3 (127218265-127218453) | |
| 822-973, gnl|Hg17|chr3 (127218418-127218267) | |
| 822-973, gnl|loxAfr1|scaffold_25051 (16294-16461) | |
| 822-973, gnl|mm7|chr6 (90715695-90715510) | |
| 822-973, gnl|Mm7|chr6 (90715540-90715691) | |
| 822-973, gnl|oryCun1|scaffold_110029 (9163-9348) | |
| 822-973, gnl|panTro1|chr2 (129066786-129066974) | |
| 822-973, gnl|rheMac2|chr2 (45799154-45799342) | |
| 822-973, gnl|tetNig1|chrUn_random (48686240-48686114) | |
| 822-973, gnl|xenTro1|scaffold_368 (9033-8858) | |
| 1048-1181, gnl|bosTau2|chr7 (16827560-16827693) | |
| 1048-1181, gnl|Hg17|chr3 (127214291-127214158) | |
| 1048-1181, gnl|Mm7|chr6 (90720895-90721028) | |
| 1183-1319, gnl|bosTau2|chr7 (16828706-16828842) | |
| 1183-1319, gnl|canFam2|chr20 (3176085-3176246) | |
| 1183-1319, gnl|danRer3|chrUn (17877419-17877580) | |
| 1183-1319, gnl|echTel1|scaffold_58886 (2221-2381) | |
| 1183-1319, gnl|fr1|chrUn (245650727-245650567) | |
| 1183-1319, gnl|hg17|chr3 (127210269-127210430) | |
| 1183-1319, gnl|Hg17|chr3 (127210422-127210286) | |
| 1183-1319, gnl|loxAfr1|scaffold_57561 (5087-5248) | |
| 1183-1319, gnl|mm7|chr6 (90722924-90722765) | |
| 1183-1319, gnl|Mm7|chr6 (90722769-90722905) | |
| 1183-1319, gnl|oryCun1|scaffold_110029 (3823-3983) | |
| 1183-1319, gnl|panTro1|chr2 (129058779-129058940) | |
| 1183-1319, gnl|rheMac2|chr2 (45790863-45791024) | |
| 1183-1319, gnl|rn3|chr7 (22663792-22663631) | |
| 1183-1319, gnl|tetNig1|chrUn_random (48692573-48692412) | |
| 1183-1319, gnl|xenTro1|scaffold_368 (14060-13900) |