Ss1.1-Utr1-UTR010033H11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCAGAAGAGGTTAAGAACCTCAGTGCTAGACCATAGGGACCNTGAGGGATTAGAGCCGAC CTTTGTGTGTGTGTGTGGGGGGGGGGGGGTTAATATGTGTTTCCTTATGCATACATCGTT TCTAATCTTCACAACAGTCCCTTGAAGGAAGTGTTTGTTAGTACACCCATTTTTCAGATG CGGAACCTGAGAAATGAAGAAGCAGTTTGGAAAAGGCAGAGTTCCCAACAAACGCACAGA CGATCAAGCACTTATTTATTCTAGGCCGGGAACGGAGGGAGGTGCTGGGAACGCAATTCT AACCGGAGCTCGGTGCGGTGGCCGCCTCCCGCCTCGCGGGTTCGCATCCCCAGTCCAGCA CAGGGTTAGCGAATGTCGCAAAGATCTTGACTGAGTGAAGTCGATCTGCGGCCGCCGGGG CAGAAAAAGCTCCCCCGGCGCCGAGCTCCGCCCCACGCCGGGTGGGCCCCGCCCCCGTTC CCCCCCCTACCCCGCGGTCGGTATTGTCCGACGGTTCCCGGCGTCCCTCGGTTTACCTCG GTAGTTTCCGGCAATGATCGAGAGTTTCTAACGTGCCCCCTTGTTGTCTCTCGGCTGCCG TCCTCGCCTCCGCTGCCCCCCTTTTCGGCTCCCTCTCCCCCTCCCCCAGCGGCCGGGCCC GGCTGGCGCCTCTGGCGCTACGGGCTGGGCAAGATGGTGGCCTTCGGGATCTTGAGCTAC GAACACCGGCCCCTGAAGCGGCCGCGGCTGGGGCCTCCGGATGTGTACCCTCAAGATCCC AAACAGAAGGAGGTACGTTCAAAAATCCGGGCTCCCCAGGGGCCGGGGGCCAGCGATCGG CAGAAGAGGAAGGATGAACATGGCAGTGCCAAGAACGTCAACTTCAATCCTGCCAAGATC AGTTCCAACTTCAGCAGCATCATCGCAGAGAAGTTAAGGTGTAATACTCTCTCTGACACT GGTCGAAGGAAGTCCCTAATGAACCAGAAGGACAACTTCTGGCTGGTGACTGCAAGATCT CAGAGTGCTATTAACACCTGGTTCACTGACCTAGCTGGCACTAAACCACTCACACACCTA GCCAAAAAAGTCCCCATTTTCAGTAAGAAGGAAGAAGTATTTGGGTACTTGGCCAATACA CAGTGCCTGTGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCAGAAGAGGTTAAGAACCTCAGTGCTAGACCATAGGGACCNTGAGGGATTAGAGCCGAC CTTTGTGTGTGTGTGTGGGGGGGGGGGGGTTAATATGTGTTTCCTTATGCATACATCGTT TCTAATCTTCACAACAGTCCCTTGAAGGAAGTGTTTGTTAGTACACCCATTTTTCAGATG CGGAACCTGAGAAATGAAGAAGCAGTTTGGAAAAGGCAGAGTTCCCAACAAACGCACAGA CGATCAAGCACTTATTTATTCTAGGCCGGGAACGGAGGGAGGTGCTGGGAACGCAATTCT AACCGGAGCTCGGTGCGGTGGCCGCCTCCCGCCTCGCGGGTTCGCATCCCCAGTCCAGCA CAGGGTTAGCGAATGTCGCAAAGATCTTGACTGAGTGAAGTCGATCTGCGGCCGCCGGGG CAGAAAAAGCTCCCCCGGCGCCGAGCTCCGCCCCACGCCGGGTGGGCCCCGCCCCCGTTC CCCCCCCTACCCCGCGGTCGGTATTGTCCGACGGTTCCCGGCGTCCCTCGGTTTACCTCG GTAGTTTCCGGCAATGATCGAGAGTTTCTAACGTGCCCCCTTGTTGTCTCTCGGCTGCCG TCCTCGCCTCCGCTGCCCCCCTTTTCGGCTCCCTCTCCCCCTCCCCCAGCGGCCGGGCCC GGCTGGCGCCTCTGGCGCTACGGGCTGGGCAAGATGGTGGCCTTCGGGATCTTGAGCTAC GAACACCGGCCCCTGAAGCGGCCGCGGCTGGGGCCTCCGGATGTGTACCCTCAAGATCCC AAACAGAAGGAGGTACGTTCAAAAATCCGGGCTCCCCAGGGGCCGGGGGCCAGCGATCGG CAGAAGAGGAAGGATGAACATGGCAGTGCCAAGAACGTCAACTTCAATCCTGCCAAGATC AGTTCCAACTTCAGCAGCATCATCGCAGAGAAGTTAAGGTGTAATACTCTCTCTGACACT GGTCGAAGGAAGTCCCTAATGAACCAGAAGGACAACTTCTGGCTGGTGACTGCAAGATCT CAGAGTGCTATTAACACCTGGTTCACTGACCTAGCTGGCACTAAACCACTCACACACCTA GCCAAAAAAGTCCCCATTTTCAGTAAGAAGGAAGAAGTATTTGGGTACTTGGCCAATACA CAGTGCCTGTGA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 972-1091, + strand, RNAz p=0.728331 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 972-1091, + strand, RNAz p=0.728331 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of AF071309, + |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 86-852, gnl|bosTau2|chrX (21907922-21908669) | |
| 86-852, gnl|Hg17|chrX (70121038-70121784) | |
| 86-852, gnl|Mm7|chrX (96601030-96601773) | |
| 896-1091, gnl|bosTau2|chrX (21909448-21909643) | |
| 896-1091, gnl|canFam2|chr23 (48767170-48767353) | |
| 896-1091, gnl|canFam2|chrX (58415030-58415269) | |
| 896-1091, gnl|dasNov1|scaffold_193327 (1131-1314) | |
| 896-1091, gnl|dasNov1|scaffold_193327 (1130-1369) | |
| 896-1091, gnl|echTel1|scaffold_311338 (100074-99891) | |
| 896-1091, gnl|echTel1|scaffold_311338 (100075-99836) | |
| 896-1091, gnl|fr1|chrUn (70765227-70765051) | |
| 896-1091, gnl|fr1|chrUn (70765223-70765004) | |
| 896-1091, gnl|galGal2|chr4 (2213109-2212868) | |
| 896-1091, gnl|galGal2|chr9 (23029607-23029424) | |
| 896-1091, gnl|hg17|chr3 (152323255-152323438) | |
| 896-1091, gnl|hg17|chrX (70122543-70122782) | |
| 896-1091, gnl|Hg17|chrX (70122555-70122750) | |
| 896-1091, gnl|mm7|chr3 (59166376-59166559) | |
| 896-1091, gnl|mm7|chrX (96602513-96602753) | |
| 896-1091, gnl|Mm7|chrX (96602525-96602720) | |
| 896-1091, gnl|monDom2|scaffold_188 (1193925-1194166) | |
| 896-1091, gnl|monDom2|scaffold_28 (22967406-22967591) | |
| 896-1091, gnl|oryCun1|scaffold_136097 (7490-7672) | |
| 896-1091, gnl|oryCun1|scaffold_176291 (58975-58736) | |
| 896-1091, gnl|panTro1|chr2 (155528869-155529052) | |
| 896-1091, gnl|panTro1|chrX (72308610-72308849) | |
| 896-1091, gnl|rheMac2|chr2 (136618517-136618334) | |
| 896-1091, gnl|rheMac2|chrX (70027699-70027938) | |
| 896-1091, gnl|rn3|chr2 (148364036-148364220) | |
| 896-1091, gnl|rn3|chrX (89425882-89426122) | |
| 896-1091, gnl|tetNig1|chr1 (4877601-4877425) | |
| 896-1091, gnl|tetNig1|chr1 (4877602-4877389) | |
| 896-1091, gnl|xenTro1|scaffold_482 (271805-271988) | |
| 896-1091, gnl|xenTro1|scaffold_482 (271817-272025) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 86-852, gnl|bosTau2|chrX (21907922-21908669) | |
| 86-852, gnl|Hg17|chrX (70121038-70121784) | |
| 86-852, gnl|Mm7|chrX (96601030-96601773) | |
| 896-1091, gnl|bosTau2|chrX (21909448-21909643) | |
| 896-1091, gnl|canFam2|chr23 (48767170-48767353) | |
| 896-1091, gnl|canFam2|chrX (58415030-58415269) | |
| 896-1091, gnl|dasNov1|scaffold_193327 (1131-1314) | |
| 896-1091, gnl|dasNov1|scaffold_193327 (1130-1369) | |
| 896-1091, gnl|echTel1|scaffold_311338 (100074-99891) | |
| 896-1091, gnl|echTel1|scaffold_311338 (100075-99836) | |
| 896-1091, gnl|fr1|chrUn (70765227-70765051) | |
| 896-1091, gnl|fr1|chrUn (70765223-70765004) | |
| 896-1091, gnl|galGal2|chr4 (2213109-2212868) | |
| 896-1091, gnl|galGal2|chr9 (23029607-23029424) | |
| 896-1091, gnl|hg17|chr3 (152323255-152323438) | |
| 896-1091, gnl|hg17|chrX (70122543-70122782) | |
| 896-1091, gnl|Hg17|chrX (70122555-70122750) | |
| 896-1091, gnl|mm7|chr3 (59166376-59166559) | |
| 896-1091, gnl|mm7|chrX (96602513-96602753) | |
| 896-1091, gnl|Mm7|chrX (96602525-96602720) | |
| 896-1091, gnl|monDom2|scaffold_188 (1193925-1194166) | |
| 896-1091, gnl|monDom2|scaffold_28 (22967406-22967591) | |
| 896-1091, gnl|oryCun1|scaffold_136097 (7490-7672) | |
| 896-1091, gnl|oryCun1|scaffold_176291 (58975-58736) | |
| 896-1091, gnl|panTro1|chr2 (155528869-155529052) | |
| 896-1091, gnl|panTro1|chrX (72308610-72308849) | |
| 896-1091, gnl|rheMac2|chr2 (136618517-136618334) | |
| 896-1091, gnl|rheMac2|chrX (70027699-70027938) | |
| 896-1091, gnl|rn3|chr2 (148364036-148364220) | |
| 896-1091, gnl|rn3|chrX (89425882-89426122) | |
| 896-1091, gnl|tetNig1|chr1 (4877601-4877425) | |
| 896-1091, gnl|tetNig1|chr1 (4877602-4877389) | |
| 896-1091, gnl|xenTro1|scaffold_482 (271805-271988) | |
| 896-1091, gnl|xenTro1|scaffold_482 (271817-272025) |