Ss1.1-Utr1-UTR010039F08.5
|
AAAAAAGAGCAGGGGTGTTGGGCCTGACGGGCGAACCTAGGCTGCGGGTGGCTGGGCGGT
TTCGCGGGGGTGGTGTACGGGAGAGCTGCGGTGCCCGGGGCGCCCAGGGCTGAGGCTGCA
ACTCCGGGAGGTACCTGAGCTAGTGGGCAGGCAAGGAGGAGCGGCCAGTGAGACGCCGCG
GGCCGGGACCATGGGCTGCTTCTTCTCCAAGAGGCAGAAGGCTGAGAAGGAGTCGCAGCC
CGAGGGCGAGGAGGAGCGGCCGAAGCAGTACAGCTGGGACCAGCGCGAAAAGGTCGATCC
AAAGGACTTCATGTTCAGCGGCCTGAAGGACGAAACAGTAGGTCGCTTACCTGGGAAAGT
GGCAGGACAACAGTTTCTCATTCAAGACTGTGAGAACTGTAACATCTACATTTTTGATCA
CTCTGCCACAGTCACTATCGGTGACTGTACCAACTGTGTCATTTTTCTGGGACCCGTGAA
AGGCAGCGTGTTCTTCCGGAATTGCAGAGATTGCAAGTGCGCCCTAGCCTGCCAGCAGTT
TCGTGTGCGGGACTGTCGAAAGCTGGAGGTCTTTCTGTGCTGTGCCACTCAGCCCATCAT
CGAGTCTTCCACACATATCAAGTTCGGCTGTTTTCAGTGGTACTACCCTGAACTAGCGTT
CCAGTTCAAAGATGCAGGGCTCAGTATCTTCAATAATACCTGGAGTAACATTCATGACTT
TACACCTGTGCCAGGAGAGCTCAACTGGAGCCTTCTGCCGGAAGATGCTGTCGTGGAAGA
TCATGTGCCTCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAAAAGAGCAGGGGTGTTGGGCCTGACGGGCGAACCTAGGCTGCGGGTGGCTGGGCGGT
TTCGCGGGGGTGGTGTACGGGAGAGCTGCGGTGCCCGGGGCGCCCAGGGCTGAGGCTGCA
ACTCCGGGAGGTACCTGAGCTAGTGGGCAGGCAAGGAGGAGCGGCCAGTGAGACGCCGCG
GGCCGGGACCATGGGCTGCTTCTTCTCCAAGAGGCAGAAGGCTGAGAAGGAGTCGCAGCC
CGAGGGCGAGGAGGAGCGGCCGAAGCAGTACAGCTGGGACCAGCGCGAAAAGGTCGATCC
AAAGGACTTCATGTTCAGCGGCCTGAAGGACGAAACAGTAGGTCGCTTACCTGGGAAAGT
GGCAGGACAACAGTTTCTCATTCAAGACTGTGAGAACTGTAACATCTACATTTTTGATCA
CTCTGCCACAGTCACTATCGGTGACTGTACCAACTGTGTCATTTTTCTGGGACCCGTGAA
AGGCAGCGTGTTCTTCCGGAATTGCAGAGATTGCAAGTGCGCCCTAGCCTGCCAGCAGTT
TCGTGTGCGGGACTGTCGAAAGCTGGAGGTCTTTCTGTGCTGTGCCACTCAGCCCATCAT
CGAGTCTTCCACACATATCAAGTTCGGCTGTTTTCAGTGGTACTACCCTGAACTAGCGTT
CCAGTTCAAAGATGCAGGGCTCAGTATCTTCAATAATACCTGGAGTAACATTCATGACTT
TACACCTGTGCCAGGAGAGCTCAACTGGAGCCTTCTGCCGGAAGATGCTGTCGTGGAAGA
TCATGTGCCTCT
|
|
gi|55662839|ref|XP_521029.1| |
Protein identifier
|
gi|55662839|ref|XP_521029.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
291-792, gnl|bosTau2|chrX (24601020-24601521) |
|
291-792, gnl|canFam2|chrX (40438442-40438855) |
|
291-792, gnl|danRer3|chr6 (18211112-18211523) |
|
291-792, gnl|dasNov1|scaffold_176801 (1593-2008) |
|
291-792, gnl|echTel1|scaffold_322772 (29369-28990) |
|
291-792, gnl|fr1|chrUn (199684196-199683787) |
|
291-792, gnl|galGal2|chr1 (123241375-123240953) |
|
291-792, gnl|hg17|chrX (46469130-46469543) |
|
291-792, gnl|Hg17|chrX (46469163-46469664) |
|
291-792, gnl|loxAfr1|scaffold_49282 (2960-2547) |
|
291-792, gnl|mm7|chrX (18809995-18810409) |
|
291-792, gnl|Mm7|chrX (18810029-18810530) |
|
291-792, gnl|monDom2|scaffold_11 (7175838-7175418) |
|
291-792, gnl|oryCun1|scaffold_133340 (11907-11494) |
|
291-792, gnl|panTro1|chrX (48043114-48043494) |
|
291-792, gnl|rheMac2|chrX (44685873-44686286) |
|
291-792, gnl|rn3|chrX (13331534-13331120) |
|
291-792, gnl|tetNig1|chr1_random (1248612-1249007) |
|
291-792, gnl|xenTro1|scaffold_516 (269214-268798) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
291-792, gnl|bosTau2|chrX (24601020-24601521) |
|
291-792, gnl|canFam2|chrX (40438442-40438855) |
|
291-792, gnl|danRer3|chr6 (18211112-18211523) |
|
291-792, gnl|dasNov1|scaffold_176801 (1593-2008) |
|
291-792, gnl|echTel1|scaffold_322772 (29369-28990) |
|
291-792, gnl|fr1|chrUn (199684196-199683787) |
|
291-792, gnl|galGal2|chr1 (123241375-123240953) |
|
291-792, gnl|hg17|chrX (46469130-46469543) |
|
291-792, gnl|Hg17|chrX (46469163-46469664) |
|
291-792, gnl|loxAfr1|scaffold_49282 (2960-2547) |
|
291-792, gnl|mm7|chrX (18809995-18810409) |
|
291-792, gnl|Mm7|chrX (18810029-18810530) |
|
291-792, gnl|monDom2|scaffold_11 (7175838-7175418) |
|
291-792, gnl|oryCun1|scaffold_133340 (11907-11494) |
|
291-792, gnl|panTro1|chrX (48043114-48043494) |
|
291-792, gnl|rheMac2|chrX (44685873-44686286) |
|
291-792, gnl|rn3|chrX (13331534-13331120) |
|
291-792, gnl|tetNig1|chr1_random (1248612-1249007) |
|
291-792, gnl|xenTro1|scaffold_516 (269214-268798) |
