Non-Coding RNA Search

Ss1.1-Utr1-UTR010051B06.5

Sequence:


               
               AACAGACCTAAACAAAGCCACAGCCCTGTGTTGTCTCCTTTCATATCTGCATGCCCCCTT
CATCCAGAACTTTTTTCCTCTTGATTTCTCCCATGGAAGACTCAACCCCCTTGAAGCAAG
AAAAAGAAAACCGAGAACTTAGGGAAGAAGGGCAACTGTGGGAAGAAATGCTAACAACTT
TGTCCCAAGATCCTGAGCCTGGGTTATCTGAGACCCCAAAGTTGGAGCAGGGGATGGAAA
CTAGATTCCAGCCCAGGAGTAGCCCTTCTGGGAGCCCCCAGTCTGGAGCCAGAACGCCTA
TGGATGACCTTGCAGGACCACGTGCATCATCTCCACCCTCCTCATCTCAGGAGCCCTCTG
CCATTCCTTCTCTCTCGGCTCTGGCCAGGCAGGACCTAATGGCAACATGGCAGTCAGACA
AGACCACTAGTGTGACTTCTGAATATGGGACACCTCACATTGACCATTTGGAACAATCAT
CTGATAAAGAAAAATCAATTTCTTATCAAACAAGTCATTCAGAGGGAAACACCTTTCAAC
AATCTCAGCAAACCAAATGTCACCTGTATGGATGGAGGGATGTGAGCTATAACAACTCTA
ATCAGAAAGAGCTGAGATTTGACATTTTTCAGGAAGAAGACTCAAACAGTATCCATGATC
TGGACCAGCCTGAGTCTGGGGCTTCTGAAGTGGCCCCTAGCATGCTTGAGATTGCCATTC
AGAATGCCAAGGCTTACCTACTAAAGACCAGCAGCAAGTCAGGCCTAAATCTATATGATC
ATCTTTCTGCAATGCTGACCAATGTCTTAGATAAGCGTCCTGAAAATGCTGTGGACATCA
TTGAAAATATCAGCCAAGATGCGAAGATGGAACACTTCAGTAAAAAATTGGATACACTCC
AAAATGAGAATGAGATGCTTCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACAGACCTAAACAAAGCCACAGCCCTGTGTTGTCTCCTTTCATATCTGCATGCCCCCTT
CATCCAGAACTTTTTTCCTCTTGATTTCTCCCATGGAAGACTCAACCCCCTTGAAGCAAG
AAAAAGAAAACCGAGAACTTAGGGAAGAAGGGCAACTGTGGGAAGAAATGCTAACAACTT
TGTCCCAAGATCCTGAGCCTGGGTTATCTGAGACCCCAAAGTTGGAGCAGGGGATGGAAA
CTAGATTCCAGCCCAGGAGTAGCCCTTCTGGGAGCCCCCAGTCTGGAGCCAGAACGCCTA
TGGATGACCTTGCAGGACCACGTGCATCATCTCCACCCTCCTCATCTCAGGAGCCCTCTG
CCATTCCTTCTCTCTCGGCTCTGGCCAGGCAGGACCTAATGGCAACATGGCAGTCAGACA
AGACCACTAGTGTGACTTCTGAATATGGGACACCTCACATTGACCATTTGGAACAATCAT
CTGATAAAGAAAAATCAATTTCTTATCAAACAAGTCATTCAGAGGGAAACACCTTTCAAC
AATCTCAGCAAACCAAATGTCACCTGTATGGATGGAGGGATGTGAGCTATAACAACTCTA
ATCAGAAAGAGCTGAGATTTGACATTTTTCAGGAAGAAGACTCAAACAGTATCCATGATC
TGGACCAGCCTGAGTCTGGGGCTTCTGAAGTGGCCCCTAGCATGCTTGAGATTGCCATTC
AGAATGCCAAGGCTTACCTACTAAAGACCAGCAGCAAGTCAGGCCTAAATCTATATGATC
ATCTTTCTGCAATGCTGACCAATGTCTTAGATAAGCGTCCTGAAAATGCTGTGGACATCA
TTGAAAATATCAGCCAAGATGCGAAGATGGAACACTTCAGTAAAAAATTGGATACACTCC
AAAATGAGAATGAGATGCTTCCCA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q5TD95_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5TD95_HUMAN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               623-775, - strand, RNAz p=0.657286

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               623-775, - strand, RNAz p=0.657286

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-775, gnl|bosTau2|chr9 (17001600-17002379)
               

               
               3-775, gnl|Hg17|chr6 (117044389-117045168)
               

               
               3-775, gnl|Mm7|chr10 (33685724-33686485)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-775, gnl|bosTau2|chr9 (17001600-17002379)
               

               
               3-775, gnl|Hg17|chr6 (117044389-117045168)
               

               
               3-775, gnl|Mm7|chr10 (33685724-33686485)

	3-775, gnl\|bosTau2\|chr9 (17001600-17002379)
	3-775, gnl\|Hg17\|chr6 (117044389-117045168)
	3-775, gnl\|Mm7\|chr10 (33685724-33686485)