Non-Coding RNA Search

Ss1.1-Utr1-UTR010061E12.5

Sequence:


               
               AGATGGCCCGGCCTCCCCCCTCTGGGCCCTCCCTTCTGCCGGCTCCCCTCGGGTCCTCTC
CCCTCCCCCTGCCCGTCCCTGGGGTCCCGGCTCCCGTCTCCCACTCCTCTGCCACCTCCT
TCTTCCCCATGCCCCCACCCTGCCCTCTCTCCCTCCACGGCTTCTTTCTCCATCTGCCTC
TCCTCCCTCCATCTGCTTCTCCTTGTTCCTTCCATCTGTCTGTCCTCTGTCCGTCCTCCC
GGCCCTCCTCCCTCCACCCCACTTCCTTTCTCCTTCTGGGCTTTCTCCCCAACCTGTCGA
CGCCACCCCGCTCTTGCCTTGCTCTGCCCCATCTTTTGGGTCCCCTCCCTGCCTGTTCCT
CACCCCTCTGCCCATTCCCCCAATCCCTCCCTCCTGTGCTGGCCCCTCCCTTGCTCTCTG
TCTGCCGGCCTCCTTTTCTGTCCCTCACTCTGTCTGTCTGTACCTTTCTTGCCTCAACTT
TCTCTGCCCACGTGTCTTTCGACATCCATGTCATTTCCCTTTTGGTGAATCTGCCGTTCC
CCACCTTCTGGCATACTGTGTCCTGTCCTGGCACCTCTGTCTGTCCTTACCTGTATGGAA
CCAGCGTCCAGTCCGTGCGAGAGGTGGCAGAGCAGGGGAAGCACTGCATCCTCGACGTCT
CGGCCAATGCCGTGCGGCGGCTGCAGGCGGCCCACCTGCATCCTATCGCCATCTTCATCC
GCCCCCGCTCCCTGGAGAATGTTCTGTGAGTATGGTAGCGGATCACAGAGGAGCAAGCCC
GCAAAGCCTTCGACAGAGCCTCCAAACTGGAGCAGGAATTCACAGAGTGCTTCTCAGCCA
TCGTGGAGGGCGACAGCTTTGANGAGATCTACCACANGGTGAAGCGTGTCATCGAGGACC
TCTCAGGCCCCTACATCTGGGTCCCAGCCNGAGAGAGACTCTGAATCCCCTTCCTGGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATGGCCCGGCCTCCCCCCTCTGGGCCCTCCCTTCTGCCGGCTCCCCTCGGGTCCTCTC
CCCTCCCCCTGCCCGTCCCTGGGGTCCCGGCTCCCGTCTCCCACTCCTCTGCCACCTCCT
TCTTCCCCATGCCCCCACCCTGCCCTCTCTCCCTCCACGGCTTCTTTCTCCATCTGCCTC
TCCTCCCTCCATCTGCTTCTCCTTGTTCCTTCCATCTGTCTGTCCTCTGTCCGTCCTCCC
GGCCCTCCTCCCTCCACCCCACTTCCTTTCTCCTTCTGGGCTTTCTCCCCAACCTGTCGA
CGCCACCCCGCTCTTGCCTTGCTCTGCCCCATCTTTTGGGTCCCCTCCCTGCCTGTTCCT
CACCCCTCTGCCCATTCCCCCAATCCCTCCCTCCTGTGCTGGCCCCTCCCTTGCTCTCTG
TCTGCCGGCCTCCTTTTCTGTCCCTCACTCTGTCTGTCTGTACCTTTCTTGCCTCAACTT
TCTCTGCCCACGTGTCTTTCGACATCCATGTCATTTCCCTTTTGGTGAATCTGCCGTTCC
CCACCTTCTGGCATACTGTGTCCTGTCCTGGCACCTCTGTCTGTCCTTACCTGTATGGAA
CCAGCGTCCAGTCCGTGCGAGAGGTGGCAGAGCAGGGGAAGCACTGCATCCTCGACGTCT
CGGCCAATGCCGTGCGGCGGCTGCAGGCGGCCCACCTGCATCCTATCGCCATCTTCATCC
GCCCCCGCTCCCTGGAGAATGTTCTGTGAGTATGGTAGCGGATCACAGAGGAGCAAGCCC
GCAAAGCCTTCGACAGAGCCTCCAAACTGGAGCAGGAATTCACAGAGTGCTTCTCAGCCA
TCGTGGAGGGCGACAGCTTTGANGAGATCTACCACANGGTGAAGCGTGTCATCGAGGACC
TCTCAGGCCCCTACATCTGGGTCCCAGCCNGAGAGAGACTCTGAATCCCCTTCCTGGCTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|52545688|emb|CAD38582.2|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|52545688|emb|CAD38582.2|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               4-756, gnl|bosTau2|chr19 (20454768-20454031)
               

               
               4-756, gnl|Hg17|chr17 (7036688-7035925)
               

               
               4-756, gnl|Mm7|chr11 (70124599-70125352)
               


               
               835-959, gnl|bosTau2|chr19 (20453093-20452970)
               

               
               835-959, gnl|Hg17|chr17 (7034860-7034737)
               

               
               835-959, gnl|Mm7|chr11 (70126160-70126283)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-756, gnl|bosTau2|chr19 (20454768-20454031)
               

               
               4-756, gnl|Hg17|chr17 (7036688-7035925)
               

               
               4-756, gnl|Mm7|chr11 (70124599-70125352)
               


               
               835-959, gnl|bosTau2|chr19 (20453093-20452970)
               

               
               835-959, gnl|Hg17|chr17 (7034860-7034737)
               

               
               835-959, gnl|Mm7|chr11 (70126160-70126283)

	4-756, gnl\|bosTau2\|chr19 (20454768-20454031)
	4-756, gnl\|Hg17\|chr17 (7036688-7035925)
	4-756, gnl\|Mm7\|chr11 (70124599-70125352)

	835-959, gnl\|bosTau2\|chr19 (20453093-20452970)
	835-959, gnl\|Hg17\|chr17 (7034860-7034737)
	835-959, gnl\|Mm7\|chr11 (70126160-70126283)