Ss1.1-Utr1-UTR010063H10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAAAACAGCTAGAAAAAGAAGTCAGAAAATTGTTCATTAGCTATATATAAATTTCTCTG ATAAAAATCTCTTGCTCTTCAGCTTGAGGCATCCAGATGTTATTGCTCTGTAACATGTAC ACATCACTGGGTTTTCTAAGATTGTAGTGAAGATTGGATATCCAGAAGTGTTATTAGGAG AGGGTTTCAAGAAGATTTAATCTGTGTCTCTCTTGTCCTAGTGGTAGGTAGAATAAATAC CAGTTTATTGAGGCAAGAAGGAGGTTTTCTCACTTCATTTTTACAGATGAGAAACCAAGT CCTGGGAATTCAGCTTATTTAAGATTACCCAATTTAAATAAAAATTGGGATTTGTAGAAT TACTGATTTCTGTATGCCAGGCAGTAGACTTGACACTTTGTATATATTCTCATTTAATTC ACTTAAAAAATAGGAGTTCCCATT------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------ATGCATGCATAAATAAATAAAAATTCACTTAAGGGGTCTTCTGGCTTC GGCGTGATCATGTTTCTCCAGTATTATCTCAGCGAGCAGGGAGACCAGGTCAATACCTTA AAGAAGCTTGACCCCACGGGACAACAGACTTGCTCGGCCCATCCTGCTCGGTTCTCCCCA AACAACAAATATTCTTGACACCGGATCACTATCAAGAAAGGCTTCAAGGTGCTCATGACC CAGCAACTGCGCCCCATCCTTTCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAAAACAGCTAGAAAAAGAAGTCAGAAAATTGTTCATTAGCTATATATAAATTTCTCTG ATAAAAATCTCTTGCTCTTCAGCTTGAGGCATCCAGATGTTATTGCTCTGTAACATGTAC ACATCACTGGGTTTTCTAAGATTGTAGTGAAGATTGGATATCCAGAAGTGTTATTAGGAG AGGGTTTCAAGAAGATTTAATCTGTGTCTCTCTTGTCCTAGTGGTAGGTAGAATAAATAC CAGTTTATTGAGGCAAGAAGGAGGTTTTCTCACTTCATTTTTACAGATGAGAAACCAAGT CCTGGGAATTCAGCTTATTTAAGATTACCCAATTTAAATAAAAATTGGGATTTGTAGAAT TACTGATTTCTGTATGCCAGGCAGTAGACTTGACACTTTGTATATATTCTCATTTAATTC ACTTAAAAAATAGGAGTTCCCATT------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------ATGCATGCATAAATAAATAAAAATTCACTTAAGGGGTCTTCTGGCTTC GGCGTGATCATGTTTCTCCAGTATTATCTCAGCGAGCAGGGAGACCAGGTCAATACCTTA AAGAAGCTTGACCCCACGGGACAACAGACTTGCTCGGCCCATCCTGCTCGGTTCTCCCCA AACAACAAATATTCTTGACACCGGATCACTATCAAGAAAGGCTTCAAGGTGCTCATGACC CAGCAACTGCGCCCCATCCTTTCG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 73-189, - strand, RNAz p=0.94055 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 73-189, - strand, RNAz p=0.94055 |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 8-218, gnl|bosTau2|chr11 (18855477-18855265) | |
| 8-218, gnl|canFam2|chr17 (32728988-32729387) | |
| 8-218, gnl|dasNov1|scaffold_202548 (1002-620) | |
| 8-218, gnl|echTel1|scaffold_317676 (69691-70078) | |
| 8-218, gnl|hg17|chr2 (37409725-37410124) | |
| 8-218, gnl|Hg17|chr2 (37410032-37409815) | |
| 8-218, gnl|oryCun1|scaffold_204090 (62733-62332) | |
| 8-218, gnl|panTro1|chr12 (38875238-38875637) | |
| 8-218, gnl|rheMac2|chr13 (37253242-37253634) | |
| 222-429, gnl|bosTau2|chr11 (18855153-18854945) | |
| 554-692, gnl|bosTau2|chr10 (21351214-21351076) | |
| 554-692, gnl|canFam2|chr30 (3757495-3757399) | |
| 554-692, gnl|danRer3|chrNA (79132802-79132895) | |
| 554-692, gnl|dasNov1|scaffold_7896 (41942-41846) | |
| 554-692, gnl|echTel1|scaffold_224860 (2614-2710) | |
| 554-692, gnl|fr1|chrUn (219774982-219775078) | |
| 554-692, gnl|hg17|chr15 (32421459-32421555) | |
| 554-692, gnl|Hg17|chr15 (32421603-32421465) | |
| 554-692, gnl|loxAfr1|scaffold_17276 (7921-7825) | |
| 554-692, gnl|mm7|chr2 (112112695-112112599) | |
| 554-692, gnl|Mm7|chr2 (112112549-112112687) | |
| 554-692, gnl|monDom2|scaffold_12 (12202447-12202543) | |
| 554-692, gnl|oryCun1|scaffold_176757 (2413-2317) | |
| 554-692, gnl|panTro1|chr16 (32068128-32068224) | |
| 554-692, gnl|rheMac2|chr7 (12584111-12584207) | |
| 554-692, gnl|rn3|chr3 (98001940-98001844) | |
| 554-692, gnl|tetNig1|chrUn_random (92593020-92592926) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 8-218, gnl|bosTau2|chr11 (18855477-18855265) | |
| 8-218, gnl|canFam2|chr17 (32728988-32729387) | |
| 8-218, gnl|dasNov1|scaffold_202548 (1002-620) | |
| 8-218, gnl|echTel1|scaffold_317676 (69691-70078) | |
| 8-218, gnl|hg17|chr2 (37409725-37410124) | |
| 8-218, gnl|Hg17|chr2 (37410032-37409815) | |
| 8-218, gnl|oryCun1|scaffold_204090 (62733-62332) | |
| 8-218, gnl|panTro1|chr12 (38875238-38875637) | |
| 8-218, gnl|rheMac2|chr13 (37253242-37253634) | |
| 222-429, gnl|bosTau2|chr11 (18855153-18854945) | |
| 554-692, gnl|bosTau2|chr10 (21351214-21351076) | |
| 554-692, gnl|canFam2|chr30 (3757495-3757399) | |
| 554-692, gnl|danRer3|chrNA (79132802-79132895) | |
| 554-692, gnl|dasNov1|scaffold_7896 (41942-41846) | |
| 554-692, gnl|echTel1|scaffold_224860 (2614-2710) | |
| 554-692, gnl|fr1|chrUn (219774982-219775078) | |
| 554-692, gnl|hg17|chr15 (32421459-32421555) | |
| 554-692, gnl|Hg17|chr15 (32421603-32421465) | |
| 554-692, gnl|loxAfr1|scaffold_17276 (7921-7825) | |
| 554-692, gnl|mm7|chr2 (112112695-112112599) | |
| 554-692, gnl|Mm7|chr2 (112112549-112112687) | |
| 554-692, gnl|monDom2|scaffold_12 (12202447-12202543) | |
| 554-692, gnl|oryCun1|scaffold_176757 (2413-2317) | |
| 554-692, gnl|panTro1|chr16 (32068128-32068224) | |
| 554-692, gnl|rheMac2|chr7 (12584111-12584207) | |
| 554-692, gnl|rn3|chr3 (98001940-98001844) | |
| 554-692, gnl|tetNig1|chrUn_random (92593020-92592926) |