Non-Coding RNA Search

Ss1.1-Utr1-UTR010064G01.5

Sequence:


               
               AAGAGTACCCTTTAAATAAAGGGCGCGAGGGCTGCCCAGGAGCGCACCCCTGTCCACCTC
CTCCTTCACGTCGCCTGTGAGAAGGAGCCAAGCCCGAGGGAGATGATGGGGCCCGAGGAG
TACAGAGAGAGAGGAAAGGAGATGGTGGATTACATCTGCCAGTACCTGAGCACTGTGCGG
GAGCGGCGTGTGACTCCAGATGTGAGACCTGGCTACCTGCGAGGCCAGCTGCCGGAGCGT
GCTCCCGAGGAGCCTGACAGCTGGGACAGCATCTTTGGAGACATAGAGCGAATCATCATG
CCTGGGGTGGTACATTGGCAAAGCCCCCATATGCACGCCTACTACCCAGCTCTCACCTCT
TGGCCATCACTGCTGGGAGACATGCTGGCTGATGCCATTAACTGCTTGGGATTCACCTGG
GCTTCCAGCCCTGTGTGCACAGAACTGGAGATGAACGTCATGGACTGGCTGGCAAAAATG
CTGGGACTCCCTGACCACTTCTTGCACCATCACCCCAGCAGCCAAGGGGGAGGCGTCTTG
CAGAGCACAGTCAGTGAGTCCACCTTGATCGCCTTGTTGGCAGCACGGAAGAACAAAATC
CTGGAAATGAAAGCATCTGAGCCTGGGGCAGATGAGTCCTGCCTGAATGCCCGGCTCATC
GCCTATGCCTCCGACCAGGCCCACTCCTCAGTGGAAAAGGCTGGTCTGATTTCTCTGGTC
AAGATGAAATTTCTGCCTGTGGATGACAACTTCTCGCTCCGGGGGGAAGCTCTTCAGAAA
GCCATTGAGGAGGACAGGGAGCGGGGCTTGGTGCCTGTCTTTGTAAGTCAGCCCGTGTTC
TGAGCTTAGAGCGATAGAGCTGGGAGGTAAGGAAGGAATTTTGGCAGAATTCAGGTAAGT
ACATGCTGCAAACAAAAGCAGGAATGTCCTCAAACACAATGTTATTACAAATTATGAGTT
AGTGTGTTAGAAAATAAATTTTGTGGGTCATAACCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAGTACCCTTTAAATAAAGGGCGCGAGGGCTGCCCAGGAGCGCACCCCTGTCCACCTC
CTCCTTCACGTCGCCTGTGAGAAGGAGCCAAGCCCGAGGGAGATGATGGGGCCCGAGGAG
TACAGAGAGAGAGGAAAGGAGATGGTGGATTACATCTGCCAGTACCTGAGCACTGTGCGG
GAGCGGCGTGTGACTCCAGATGTGAGACCTGGCTACCTGCGAGGCCAGCTGCCGGAGCGT
GCTCCCGAGGAGCCTGACAGCTGGGACAGCATCTTTGGAGACATAGAGCGAATCATCATG
CCTGGGGTGGTACATTGGCAAAGCCCCCATATGCACGCCTACTACCCAGCTCTCACCTCT
TGGCCATCACTGCTGGGAGACATGCTGGCTGATGCCATTAACTGCTTGGGATTCACCTGG
GCTTCCAGCCCTGTGTGCACAGAACTGGAGATGAACGTCATGGACTGGCTGGCAAAAATG
CTGGGACTCCCTGACCACTTCTTGCACCATCACCCCAGCAGCCAAGGGGGAGGCGTCTTG
CAGAGCACAGTCAGTGAGTCCACCTTGATCGCCTTGTTGGCAGCACGGAAGAACAAAATC
CTGGAAATGAAAGCATCTGAGCCTGGGGCAGATGAGTCCTGCCTGAATGCCCGGCTCATC
GCCTATGCCTCCGACCAGGCCCACTCCTCAGTGGAAAAGGCTGGTCTGATTTCTCTGGTC
AAGATGAAATTTCTGCCTGTGGATGACAACTTCTCGCTCCGGGGGGAAGCTCTTCAGAAA
GCCATTGAGGAGGACAGGGAGCGGGGCTTGGTGCCTGTCTTTGTAAGTCAGCCCGTGTTC
TGAGCTTAGAGCGATAGAGCTGGGAGGTAAGGAAGGAATTTTGGCAGAATTCAGGTAAGT
ACATGCTGCAAACAAAAGCAGGAATGTCCTCAAACACAATGTTATTACAAATTATGAGTT
AGTGTGTTAGAAAATAAATTTTGTGGGTCATAACCA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|13487703|gb|AAK27681.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|13487703|gb|AAK27681.1|

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               132-309, gnl|bosTau2|chr10 (41922375-41922552)
               

               
               132-309, gnl|Hg17|chr15 (48342898-48342721)
               

               
               132-309, gnl|Mm7|chr2 (126357203-126357026)
               


               
               420-543, gnl|bosTau2|chr10 (41927028-41927151)
               

               
               420-543, gnl|Hg17|chr15 (48337037-48336914)
               

               
               420-543, gnl|Mm7|chr2 (126347336-126347213)
               


               
               670-996, gnl|bosTau2|chr10 (41930408-41930729)
               

               
               670-996, gnl|Hg17|chr15 (48333771-48333434)
               

               
               670-996, gnl|Mm7|chr2 (126344846-126344386)

Aligned organism(s): 9 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               132-309, gnl|bosTau2|chr10 (41922375-41922552)
               

               
               132-309, gnl|Hg17|chr15 (48342898-48342721)
               

               
               132-309, gnl|Mm7|chr2 (126357203-126357026)
               


               
               420-543, gnl|bosTau2|chr10 (41927028-41927151)
               

               
               420-543, gnl|Hg17|chr15 (48337037-48336914)
               

               
               420-543, gnl|Mm7|chr2 (126347336-126347213)
               


               
               670-996, gnl|bosTau2|chr10 (41930408-41930729)
               

               
               670-996, gnl|Hg17|chr15 (48333771-48333434)
               

               
               670-996, gnl|Mm7|chr2 (126344846-126344386)

	132-309, gnl\|bosTau2\|chr10 (41922375-41922552)
	132-309, gnl\|Hg17\|chr15 (48342898-48342721)
	132-309, gnl\|Mm7\|chr2 (126357203-126357026)

	420-543, gnl\|bosTau2\|chr10 (41927028-41927151)
	420-543, gnl\|Hg17\|chr15 (48337037-48336914)
	420-543, gnl\|Mm7\|chr2 (126347336-126347213)

	670-996, gnl\|bosTau2\|chr10 (41930408-41930729)
	670-996, gnl\|Hg17\|chr15 (48333771-48333434)
	670-996, gnl\|Mm7\|chr2 (126344846-126344386)