Ss1.1-Utr1-UTR01D090098.5
|
AGGTGCCGGCGTCGTGGATCCGGAGCTCGGCTGCTCGACTACTCGCCAGCCCACAGCGCC
ACCAGACGGGCGGAGAGTGCGCCGCCTCGAAACTGGTTCTGGCGGTCACCGGCAGTTTCT
GATCCGAGCTTGGGGGCTGATCTCTGAGAAACGTGGGCAGAAGAGCAGAACTACCCTCCC
ACTCTGTTTCTTAAGGGCGCCACCCGGTAATGATTTTACATGACTTTGGAGTTGGTCTGT
AGTGGGACGCTGAGGGAGGATGAACACAGAAGAGCTGGAGTTACTGAGTGACTCCAAATA
CAGAAACTACGTAGCTGCGGTTGACAAAGCACTCAAGAATTTTGAATACTCCAGTGAATG
GGCAGATTTGATATCAGCACTTGGAAAACTTAATAAGGTTTTACAAAATAATGCAAAGTA
CCAAGTAGTACCGAAAAAGCTGACCATAGGCAAACGCCTAGCTCAATGTCTGCATCCAGC
ATTACCAGGTGGAGTTCATCGGAAGGCACTTGAAACATATGAAATTATCTTCAAAATCAT
TGGACCTAAGCGACTTGCCAAAGATCTTTTTTTATATAGTTCTGGACTATTTCCTCTTCT
TGCAAATGCTGCCATGTCGGTGAAACCAACACTGCTAAGTTTGTATGAGATCTATTATTT
GCCTTTGGGTAAAACACTGAAGCCTGGTCTTCAAGGACTGCTAACTGGTATTCTTCCTGG
CTTAGAGGAAGGATCGGAGTACTATGAGAGAAACAACACCTTGTTGGAAAGGTTGCTGCT
GCTGTGGACCAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGTGCCGGCGTCGTGGATCCGGAGCTCGGCTGCTCGACTACTCGCCAGCCCACAGCGCC
ACCAGACGGGCGGAGAGTGCGCCGCCTCGAAACTGGTTCTGGCGGTCACCGGCAGTTTCT
GATCCGAGCTTGGGGGCTGATCTCTGAGAAACGTGGGCAGAAGAGCAGAACTACCCTCCC
ACTCTGTTTCTTAAGGGCGCCACCCGGTAATGATTTTACATGACTTTGGAGTTGGTCTGT
AGTGGGACGCTGAGGGAGGATGAACACAGAAGAGCTGGAGTTACTGAGTGACTCCAAATA
CAGAAACTACGTAGCTGCGGTTGACAAAGCACTCAAGAATTTTGAATACTCCAGTGAATG
GGCAGATTTGATATCAGCACTTGGAAAACTTAATAAGGTTTTACAAAATAATGCAAAGTA
CCAAGTAGTACCGAAAAAGCTGACCATAGGCAAACGCCTAGCTCAATGTCTGCATCCAGC
ATTACCAGGTGGAGTTCATCGGAAGGCACTTGAAACATATGAAATTATCTTCAAAATCAT
TGGACCTAAGCGACTTGCCAAAGATCTTTTTTTATATAGTTCTGGACTATTTCCTCTTCT
TGCAAATGCTGCCATGTCGGTGAAACCAACACTGCTAAGTTTGTATGAGATCTATTATTT
GCCTTTGGGTAAAACACTGAAGCCTGGTCTTCAAGGACTGCTAACTGGTATTCTTCCTGG
CTTAGAGGAAGGATCGGAGTACTATGAGAGAAACAACACCTTGTTGGAAAGGTTGCTGCT
GCTGTGGACCAG
|
|
gi|61831742|ref|XP_607844.1| |
Protein identifier
|
gi|61831742|ref|XP_607844.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
206-399, gnl|bosTau2|chr9 (9989139-9989332) |
|
206-399, gnl|Hg17|chr6 (83863362-83863555) |
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206-399, gnl|Mm7|chr9 (86588767-86588960) |
| |
|
567-750, gnl|bosTau2|chr9 (10005704-10005887) |
|
567-750, gnl|canFam2|chr12 (46522864-46523056) |
|
567-750, gnl|danRer3|chr16 (44215739-44215550) |
|
567-750, gnl|dasNov1|scaffold_73063 (487-673) |
|
567-750, gnl|echTel1|scaffold_230514 (8154-7963) |
|
567-750, gnl|fr1|chrUn (112638758-112638949) |
|
567-750, gnl|galGal2|chr3 (76321342-76321153) |
|
567-750, gnl|hg17|chr6 (83875337-83875528) |
|
567-750, gnl|Hg17|chr6 (83875336-83875518) |
|
567-750, gnl|mm7|chr9 (86592922-86593111) |
|
567-750, gnl|Mm7|chr9 (86592923-86593103) |
|
567-750, gnl|monDom2|scaffold_0 (147059714-147059525) |
|
567-750, gnl|oryCun1|scaffold_125474 (15665-15854) |
|
567-750, gnl|panTro1|chr5 (85510857-85511048) |
|
567-750, gnl|rheMac2|chr3 (10385225-10385041) |
|
567-750, gnl|rn3|chr8 (91762057-91762246) |
|
567-750, gnl|tetNig1|chr8 (1681458-1681277) |
|
567-750, gnl|xenTro1|scaffold_73 (2425615-2425804) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
206-399, gnl|bosTau2|chr9 (9989139-9989332) |
|
206-399, gnl|Hg17|chr6 (83863362-83863555) |
|
206-399, gnl|Mm7|chr9 (86588767-86588960) |
| |
|
567-750, gnl|bosTau2|chr9 (10005704-10005887) |
|
567-750, gnl|canFam2|chr12 (46522864-46523056) |
|
567-750, gnl|danRer3|chr16 (44215739-44215550) |
|
567-750, gnl|dasNov1|scaffold_73063 (487-673) |
|
567-750, gnl|echTel1|scaffold_230514 (8154-7963) |
|
567-750, gnl|fr1|chrUn (112638758-112638949) |
|
567-750, gnl|galGal2|chr3 (76321342-76321153) |
|
567-750, gnl|hg17|chr6 (83875337-83875528) |
|
567-750, gnl|Hg17|chr6 (83875336-83875518) |
|
567-750, gnl|mm7|chr9 (86592922-86593111) |
|
567-750, gnl|Mm7|chr9 (86592923-86593103) |
|
567-750, gnl|monDom2|scaffold_0 (147059714-147059525) |
|
567-750, gnl|oryCun1|scaffold_125474 (15665-15854) |
|
567-750, gnl|panTro1|chr5 (85510857-85511048) |
|
567-750, gnl|rheMac2|chr3 (10385225-10385041) |
|
567-750, gnl|rn3|chr8 (91762057-91762246) |
|
567-750, gnl|tetNig1|chr8 (1681458-1681277) |
|
567-750, gnl|xenTro1|scaffold_73 (2425615-2425804) |
