Ss1.1-Utr1-UTR01E050093.5
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TGATGAGCACCGGGAACGAGGAAGCCCAGCTGCCTCTACCCAGAATGACCTCAACCAGGG
GGGCCCAAGGGCCCAGAGTGCCAGTTCTGAGGGGCAAGCCACCGGGTCCCTGGAGGAGGA
GAAGAGCAGGCTTCTGGCTGAGGCAGCAGTCGAACTTCGGGAGGAGAACACAAGGCAGGA
GCGGATCTTGGCCCTTGCCAAGCGCCTGGCTGTGCTTCGAGGAGAGGACCCAGATAAAGG
TAGAGGCTGGGGAGTGGCTCACTCTTGTCCAGTGGGCAGGCCCTCAACTCCCACCCCCAG
GCCAAGCTCTGCCCAGTGGCTGCTGTACTCCCTGCCAGACTGGGTCAGGGGCTGGGGGGC
CCTGTGCTCAGGAGTCTGTCGAGCTTTGTCCAGAGCCATGAAGAAAGTGCTGAGGCGATG
CAGTGGATGAGGAACAAGTGGCAGCTATCAGGGGGCAGGGGACCCTGGGTCCCTTCAGGT
GCAGATCCCCAGCCTGGCAGTGTGGCACAGGGTCTGACCAGAGTGACTGCAGAGGCTACT
CAGCTCTGGAACAGATGCCACTGGAAACCAGATTACTGGGGGCAGGAGCACAGCCACTCA
GGTGAGCTCTCAGCCTCATTCCTCCTCCCCTGCTCCCGTCTCACCCTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGATGAGCACCGGGAACGAGGAAGCCCAGCTGCCTCTACCCAGAATGACCTCAACCAGGG
GGGCCCAAGGGCCCAGAGTGCCAGTTCTGAGGGGCAAGCCACCGGGTCCCTGGAGGAGGA
GAAGAGCAGGCTTCTGGCTGAGGCAGCAGTCGAACTTCGGGAGGAGAACACAAGGCAGGA
GCGGATCTTGGCCCTTGCCAAGCGCCTGGCTGTGCTTCGAGGAGAGGACCCAGATAAAGG
TAGAGGCTGGGGAGTGGCTCACTCTTGTCCAGTGGGCAGGCCCTCAACTCCCACCCCCAG
GCCAAGCTCTGCCCAGTGGCTGCTGTACTCCCTGCCAGACTGGGTCAGGGGCTGGGGGGC
CCTGTGCTCAGGAGTCTGTCGAGCTTTGTCCAGAGCCATGAAGAAAGTGCTGAGGCGATG
CAGTGGATGAGGAACAAGTGGCAGCTATCAGGGGGCAGGGGACCCTGGGTCCCTTCAGGT
GCAGATCCCCAGCCTGGCAGTGTGGCACAGGGTCTGACCAGAGTGACTGCAGAGGCTACT
CAGCTCTGGAACAGATGCCACTGGAAACCAGATTACTGGGGGCAGGAGCACAGCCACTCA
GGTGAGCTCTCAGCCTCATTCCTCCTCCCCTGCTCCCGTCTCACCCTC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
28-346, gnl|bosTau2|chr10 (26687473-26687793) |
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28-346, gnl|Hg17|chr15 (38892187-38892488) |
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28-346, gnl|Mm7|chr2 (118955678-118956007) |
| |
|
372-488, gnl|bosTau2|chr10 (26687789-26687904) |
|
372-488, gnl|canFam2|chr30 (10940107-10940353) |
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372-488, gnl|dasNov1|scaffold_12152 (1663-1436) |
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372-488, gnl|echTel1|scaffold_315379 (39777-39637) |
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372-488, gnl|hg17|chr15 (38892396-38892606) |
|
372-488, gnl|Hg17|chr15 (38892485-38892598) |
|
372-488, gnl|loxAfr1|scaffold_2794 (19503-19639) |
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372-488, gnl|mm7|chr2 (118955893-118956124) |
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372-488, gnl|Mm7|chr2 (118956003-118956116) |
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372-488, gnl|monDom2|scaffold_12 (1391111-1390886) |
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372-488, gnl|oryCun1|scaffold_211631 (53408-53579) |
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372-488, gnl|panTro1|chr16 (38805896-38806106) |
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372-488, gnl|rheMac2|chr7 (19193899-19194112) |
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372-488, gnl|rn3|chr3 (105624702-105624900) |
| |
|
513-648, gnl|bosTau2|chr10 (26687975-26688113) |
|
513-648, gnl|Hg17|chr15 (38892684-38892821) |
|
513-648, gnl|Mm7|chr2 (118956180-118956296) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
28-346, gnl|bosTau2|chr10 (26687473-26687793) |
|
28-346, gnl|Hg17|chr15 (38892187-38892488) |
|
28-346, gnl|Mm7|chr2 (118955678-118956007) |
| |
|
372-488, gnl|bosTau2|chr10 (26687789-26687904) |
|
372-488, gnl|canFam2|chr30 (10940107-10940353) |
|
372-488, gnl|dasNov1|scaffold_12152 (1663-1436) |
|
372-488, gnl|echTel1|scaffold_315379 (39777-39637) |
|
372-488, gnl|hg17|chr15 (38892396-38892606) |
|
372-488, gnl|Hg17|chr15 (38892485-38892598) |
|
372-488, gnl|loxAfr1|scaffold_2794 (19503-19639) |
|
372-488, gnl|mm7|chr2 (118955893-118956124) |
|
372-488, gnl|Mm7|chr2 (118956003-118956116) |
|
372-488, gnl|monDom2|scaffold_12 (1391111-1390886) |
|
372-488, gnl|oryCun1|scaffold_211631 (53408-53579) |
|
372-488, gnl|panTro1|chr16 (38805896-38806106) |
|
372-488, gnl|rheMac2|chr7 (19193899-19194112) |
|
372-488, gnl|rn3|chr3 (105624702-105624900) |
| |
|
513-648, gnl|bosTau2|chr10 (26687975-26688113) |
|
513-648, gnl|Hg17|chr15 (38892684-38892821) |
|
513-648, gnl|Mm7|chr2 (118956180-118956296) |
