Ss1.1-Utr1-UTR01H120092.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGATTCCCAGGAGCGCCGCCTTCCCGGGTCTGGGCCCCCAAGACCAGAGCCGGATCTCGC TCACCTGTTCCCCTGGCGCTGTTCCCGGACAGCCCTGAGATCCTCCGGGGACCGCTCGCC CCTCAACTCCACACCATGAGCAAGTTGGGCAAGTTCTTTAAAGGGGGAGGCTCTTCCAAG AGCCGAGCTGCTCCCAGCCCCCAGGAAGCCCTGGCCCGACTTCGGGAGACAGAGGAGATG CTGGGCAAGAAACAAGAGTACCTGGAAAATCGAATCCAGAGAGAGCTCAGCCTGGCCAAG AAGCATGGCACCCAGAATAAACGAGCTGCACTGCAGGCCCTAAAGAGAAAGAAGAGGTTT GAGAAGCAGCTCACTCAGATTGATGGCACACTTTCCACCATTGAGTTCCAGAGAGAAGCC TTGGAAAACTCACACACCAACACCGAGGTGTTAAAGAACATGGGCATGGCAGCAAAAGCC ATGAAAGCCGTTCATGAAAACATGGATCTGAACAAAATAGATGATTTGATGCAAGAGATC ACAGAGCAACAGGATATTGCCCAAGAAATCTCAGAAGCGTTTTCTCAGCGGGTTGGATTT GGCGCTGACTTTGATGAGGATGAGTTGATGGCAGAGCTTGAGGAATTGGAGCAGGAAGAA TTAAATAAGAAGATGACAAATATTCGACTTCCAAATGTGCCTTCCTCCTCCCTTCCAGCC CCACCAGAGAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGATTCCCAGGAGCGCCGCCTTCCCGGGTCTGGGCCCCCAAGACCAGAGCCGGATCTCGC TCACCTGTTCCCCTGGCGCTGTTCCCGGACAGCCCTGAGATCCTCCGGGGACCGCTCGCC CCTCAACTCCACACCATGAGCAAGTTGGGCAAGTTCTTTAAAGGGGGAGGCTCTTCCAAG AGCCGAGCTGCTCCCAGCCCCCAGGAAGCCCTGGCCCGACTTCGGGAGACAGAGGAGATG CTGGGCAAGAAACAAGAGTACCTGGAAAATCGAATCCAGAGAGAGCTCAGCCTGGCCAAG AAGCATGGCACCCAGAATAAACGAGCTGCACTGCAGGCCCTAAAGAGAAAGAAGAGGTTT GAGAAGCAGCTCACTCAGATTGATGGCACACTTTCCACCATTGAGTTCCAGAGAGAAGCC TTGGAAAACTCACACACCAACACCGAGGTGTTAAAGAACATGGGCATGGCAGCAAAAGCC ATGAAAGCCGTTCATGAAAACATGGATCTGAACAAAATAGATGATTTGATGCAAGAGATC ACAGAGCAACAGGATATTGCCCAAGAAATCTCAGAAGCGTTTTCTCAGCGGGTTGGATTT GGCGCTGACTTTGATGAGGATGAGTTGATGGCAGAGCTTGAGGAATTGGAGCAGGAAGAA TTAAATAAGAAGATGACAAATATTCGACTTCCAAATGTGCCTTCCTCCTCCCTTCCAGCC CCACCAGAGAGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 615-732, - strand, RNAz p=0.677764 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 615-732, - strand, RNAz p=0.677764 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 324-504, gnl|bosTau2|chr13 (48139200-48139020) | |
| 324-504, gnl|canFam2|chr24 (26016439-26016656) | |
| 324-504, gnl|danRer3|chr15 (4645637-4645848) | |
| 324-504, gnl|dasNov1|scaffold_224970 (1476-1692) | |
| 324-504, gnl|echTel1|scaffold_313407 (45204-45422) | |
| 324-504, gnl|fr1|chrUn (151794357-151794160) | |
| 324-504, gnl|galGal2|chr20 (2011903-2011701) | |
| 324-504, gnl|hg17|chr20 (31899918-31900135) | |
| 324-504, gnl|Hg17|chr20 (31899932-31900112) | |
| 324-504, gnl|loxAfr1|scaffold_11963 (57973-58174) | |
| 324-504, gnl|mm7|chr2 (154430362-154430572) | |
| 324-504, gnl|Mm7|chr2 (154430374-154430554) | |
| 324-504, gnl|monDom2|scaffold_6 (13189146-13188936) | |
| 324-504, gnl|oryCun1|scaffold_202670 (58153-58298) | |
| 324-504, gnl|panTro1|chr21 (33868617-33868834) | |
| 324-504, gnl|rheMac2|chr10 (30757969-30757752) | |
| 324-504, gnl|rn3|chr3 (145077876-145078086) | |
| 324-504, gnl|tetNig1|chr9 (1054324-1054119) | |
| 324-504, gnl|xenTro1|scaffold_35 (1831425-1831226) | |
| 609-732, gnl|bosTau2|chr14 (49904804-49904681) | |
| 609-732, gnl|Hg17|chr8 (82832922-82833045) | |
| 609-732, gnl|Mm7|chr3 (10397724-10397844) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 324-504, gnl|bosTau2|chr13 (48139200-48139020) | |
| 324-504, gnl|canFam2|chr24 (26016439-26016656) | |
| 324-504, gnl|danRer3|chr15 (4645637-4645848) | |
| 324-504, gnl|dasNov1|scaffold_224970 (1476-1692) | |
| 324-504, gnl|echTel1|scaffold_313407 (45204-45422) | |
| 324-504, gnl|fr1|chrUn (151794357-151794160) | |
| 324-504, gnl|galGal2|chr20 (2011903-2011701) | |
| 324-504, gnl|hg17|chr20 (31899918-31900135) | |
| 324-504, gnl|Hg17|chr20 (31899932-31900112) | |
| 324-504, gnl|loxAfr1|scaffold_11963 (57973-58174) | |
| 324-504, gnl|mm7|chr2 (154430362-154430572) | |
| 324-504, gnl|Mm7|chr2 (154430374-154430554) | |
| 324-504, gnl|monDom2|scaffold_6 (13189146-13188936) | |
| 324-504, gnl|oryCun1|scaffold_202670 (58153-58298) | |
| 324-504, gnl|panTro1|chr21 (33868617-33868834) | |
| 324-504, gnl|rheMac2|chr10 (30757969-30757752) | |
| 324-504, gnl|rn3|chr3 (145077876-145078086) | |
| 324-504, gnl|tetNig1|chr9 (1054324-1054119) | |
| 324-504, gnl|xenTro1|scaffold_35 (1831425-1831226) | |
| 609-732, gnl|bosTau2|chr14 (49904804-49904681) | |
| 609-732, gnl|Hg17|chr8 (82832922-82833045) | |
| 609-732, gnl|Mm7|chr3 (10397724-10397844) |