Ss1.1-Utr2-C0001801_C21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAGGGAGCGCGAGCGGCGCAGGCGGCAGAGGCGGTGGCGCGGGGTCACCGCCCGCTCCG GCTCTCGGCGCAGGGGAATAGCCTCCTGCGGCGGCAGAGGCGGCGGCGGCGACGACGTGC GGGCGATGCTGCAGGTCTCCTCGGGCGCCGGTGTCCTGACCTCTTCCTGAAGAACGAAGA ACAAACTGAATTCATCTCAAAATGATTATAAATCATCGAGACGGAGTAGCCTGCCACCTG GTCCAGTCTGAGCCGCCTCTTTGTATGCCGCCGACATGGCCAGCCAGCAGGATTCCGGCT TCTTTGAGATCAGTATCAAATATTTACTGAAATCCTGGAGTAATACTTCTCCAGTTGGCA ACGGTTATATCAAGCCTCCAGTTCCACCTGTTTCTGGCACGCAAAAGGAGAAAGGGCCCC CCACCATGTTACCCATCAGCGTGGACCCCGACAGCAAACCAGGAGAGTATGTCCTCAAGA GTTTATTTGTCAACTTCACCACTCAGGCTGAGCGCAAGATTCGCATCATTATGGCAGAAC CCCTGGAAAAACCATTGACAAAATCTCTACAACGTGGAGAAGACCCCCAGTTTGATCAAG TCATCAGTTCAATGAGCTCCCTTTCTGAGTACTGCCTGCCTTCCATTCTGCGGACCTTAT TTGACTGGTACAAAAGGCAAAACGGCATTGAGGATGAATCCCATGAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAGGGAGCGCGAGCGGCGCAGGCGGCAGAGGCGGTGGCGCGGGGTCACCGCCCGCTCCG GCTCTCGGCGCAGGGGAATAGCCTCCTGCGGCGGCAGAGGCGGCGGCGGCGACGACGTGC GGGCGATGCTGCAGGTCTCCTCGGGCGCCGGTGTCCTGACCTCTTCCTGAAGAACGAAGA ACAAACTGAATTCATCTCAAAATGATTATAAATCATCGAGACGGAGTAGCCTGCCACCTG GTCCAGTCTGAGCCGCCTCTTTGTATGCCGCCGACATGGCCAGCCAGCAGGATTCCGGCT TCTTTGAGATCAGTATCAAATATTTACTGAAATCCTGGAGTAATACTTCTCCAGTTGGCA ACGGTTATATCAAGCCTCCAGTTCCACCTGTTTCTGGCACGCAAAAGGAGAAAGGGCCCC CCACCATGTTACCCATCAGCGTGGACCCCGACAGCAAACCAGGAGAGTATGTCCTCAAGA GTTTATTTGTCAACTTCACCACTCAGGCTGAGCGCAAGATTCGCATCATTATGGCAGAAC CCCTGGAAAAACCATTGACAAAATCTCTACAACGTGGAGAAGACCCCCAGTTTGATCAAG TCATCAGTTCAATGAGCTCCCTTTCTGAGTACTGCCTGCCTTCCATTCTGCGGACCTTAT TTGACTGGTACAAAAGGCAAAACGGCATTGAGGATGAATCCCATGAAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 346-546, gnl|bosTau2|chr12 (16165279-16165079) | |
| 346-546, gnl|Hg17|chr13 (31550971-31551171) | |
| 346-546, gnl|Mm7|chr5 (149243433-149243633) | |
| 600-706, gnl|bosTau2|chr12 (16124303-16124197) | |
| 600-706, gnl|canFam2|chr13 (47369355-47369525) | |
| 600-706, gnl|canFam2|chr25 (10996855-10996674) | |
| 600-706, gnl|danRer3|chr15 (1245314-1245149) | |
| 600-706, gnl|danRer3|chrUn (102971694-102971851) | |
| 600-706, gnl|dasNov1|scaffold_143046 (3088-2918) | |
| 600-706, gnl|dasNov1|scaffold_817 (97150-96991) | |
| 600-706, gnl|echTel1|scaffold_309306 (90368-90216) | |
| 600-706, gnl|echTel1|scaffold_309306 (90212-90379) | |
| 600-706, gnl|fr1|chrUn (56857312-56857462) | |
| 600-706, gnl|fr1|chrUn (37596053-37595899) | |
| 600-706, gnl|galGal2|chr1 (166751091-166750925) | |
| 600-706, gnl|galGal2|chr4 (66837936-66837776) | |
| 600-706, gnl|hg17|chr13 (31589455-31589639) | |
| 600-706, gnl|Hg17|chr13 (31589471-31589577) | |
| 600-706, gnl|hg17|chr4 (48463567-48463737) | |
| 600-706, gnl|loxAfr1|scaffold_80748 (8751-8912) | |
| 600-706, gnl|loxAfr1|scaffold_80748 (8919-8749) | |
| 600-706, gnl|mm7|chr5 (149273497-149273661) | |
| 600-706, gnl|mm7|chr5 (72508016-72508183) | |
| 600-706, gnl|Mm7|chr5 (149273516-149273622) | |
| 600-706, gnl|monDom2|scaffold_15 (42537927-42538115) | |
| 600-706, gnl|monDom2|scaffold_26 (15085612-15085782) | |
| 600-706, gnl|oryCun1|scaffold_214616 (44134-43964) | |
| 600-706, gnl|oryCun1|scaffold_215408 (186058-185872) | |
| 600-706, gnl|panTro1|chr14 (30784432-30784616) | |
| 600-706, gnl|panTro1|chr3 (98427398-98427228) | |
| 600-706, gnl|rheMac2|chr17 (11486094-11486278) | |
| 600-706, gnl|rheMac2|chr5 (43938920-43939090) | |
| 600-706, gnl|rn3|chr12 (5044589-5044425) | |
| 600-706, gnl|rn3|chr14 (37488952-37488785) | |
| 600-706, gnl|tetNig1|chr16 (4672580-4672423) | |
| 600-706, gnl|tetNig1|chr7 (2429808-2429961) | |
| 600-706, gnl|xenTro1|scaffold_1165 (66260-66415) | |
| 600-706, gnl|xenTro1|scaffold_384 (1190216-1190025) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 346-546, gnl|bosTau2|chr12 (16165279-16165079) | |
| 346-546, gnl|Hg17|chr13 (31550971-31551171) | |
| 346-546, gnl|Mm7|chr5 (149243433-149243633) | |
| 600-706, gnl|bosTau2|chr12 (16124303-16124197) | |
| 600-706, gnl|canFam2|chr13 (47369355-47369525) | |
| 600-706, gnl|canFam2|chr25 (10996855-10996674) | |
| 600-706, gnl|danRer3|chr15 (1245314-1245149) | |
| 600-706, gnl|danRer3|chrUn (102971694-102971851) | |
| 600-706, gnl|dasNov1|scaffold_143046 (3088-2918) | |
| 600-706, gnl|dasNov1|scaffold_817 (97150-96991) | |
| 600-706, gnl|echTel1|scaffold_309306 (90368-90216) | |
| 600-706, gnl|echTel1|scaffold_309306 (90212-90379) | |
| 600-706, gnl|fr1|chrUn (56857312-56857462) | |
| 600-706, gnl|fr1|chrUn (37596053-37595899) | |
| 600-706, gnl|galGal2|chr1 (166751091-166750925) | |
| 600-706, gnl|galGal2|chr4 (66837936-66837776) | |
| 600-706, gnl|hg17|chr13 (31589455-31589639) | |
| 600-706, gnl|Hg17|chr13 (31589471-31589577) | |
| 600-706, gnl|hg17|chr4 (48463567-48463737) | |
| 600-706, gnl|loxAfr1|scaffold_80748 (8751-8912) | |
| 600-706, gnl|loxAfr1|scaffold_80748 (8919-8749) | |
| 600-706, gnl|mm7|chr5 (149273497-149273661) | |
| 600-706, gnl|mm7|chr5 (72508016-72508183) | |
| 600-706, gnl|Mm7|chr5 (149273516-149273622) | |
| 600-706, gnl|monDom2|scaffold_15 (42537927-42538115) | |
| 600-706, gnl|monDom2|scaffold_26 (15085612-15085782) | |
| 600-706, gnl|oryCun1|scaffold_214616 (44134-43964) | |
| 600-706, gnl|oryCun1|scaffold_215408 (186058-185872) | |
| 600-706, gnl|panTro1|chr14 (30784432-30784616) | |
| 600-706, gnl|panTro1|chr3 (98427398-98427228) | |
| 600-706, gnl|rheMac2|chr17 (11486094-11486278) | |
| 600-706, gnl|rheMac2|chr5 (43938920-43939090) | |
| 600-706, gnl|rn3|chr12 (5044589-5044425) | |
| 600-706, gnl|rn3|chr14 (37488952-37488785) | |
| 600-706, gnl|tetNig1|chr16 (4672580-4672423) | |
| 600-706, gnl|tetNig1|chr7 (2429808-2429961) | |
| 600-706, gnl|xenTro1|scaffold_1165 (66260-66415) | |
| 600-706, gnl|xenTro1|scaffold_384 (1190216-1190025) |