Non-Coding RNA Search

Ss1.1-Utr2-C0001810_B17.5

Sequence:


               
               GCTAGACCTCGCTCTGCTGGAGTCAGCAGGTCATTCATTGGTCAGGAGCCTCTTGCCAAA
CAACCAGATGTTCCTAGAGAACCCCAGCAAGTCGTGCCATTTTGTCTCACTCTGCTGCCT
TCTCCCCCACCCTAGCTCTGGAGGCTGCTCGTATTTGTGCCAACAAGTACATGGTGAAAA
GTTGTGGCAAAGATGGTTTTCACATCCGAGTGCGGCTACACCCCTTCCACGTCATCCGCA
TCAATAAGATGCTGTCCTGTGCCGGAGCTGACAGGTGAGCGGGGTCTTGGAGTTTTGTCT
TTATCTCGAAGCCTCCGTATCAGGCTTTTCATCAGCCAGAGCCAAGAGGCCAAGGGCTGG
GAAATGAATTTCAGTAAACACTCTCCTCCGACCACCGCACAGACGGAACAGAAGCCGCAG
AATCCCGGGAACAAAGGCAGCGCAGCTTGGGGGCAACAGGTGGAGGGTGGTCTTTCGGAG
GAGGTAGCTCATCTCTAAGCCTGATGCCATCCTTGCACACAGGCACGTAGCTGGGGTGGT
CACGGGTTGGAGGGCTTTTTCTGTGGCACCTGGCAGGGATTCTAGCCAGTCTGTTCCAGG
GTCCTCTTTGCAGCCAATTAAGCCGACCGTGCTCTTTTCCCCATGGGGGCCCGGTGTGCA
ATGGCTGCAAACAGCAGCCTCCTCGGTAGTGTATGCAGCCTGTTGCCGGTATAGGCTGCC
CTAAGGGACCTTGGAGACAGCCCTTTCCAGTGGGCAGTCATGACTGGCATGCTGTCCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTAGACCTCGCTCTGCTGGAGTCAGCAGGTCATTCATTGGTCAGGAGCCTCTTGCCAAA
CAACCAGATGTTCCTAGAGAACCCCAGCAAGTCGTGCCATTTTGTCTCACTCTGCTGCCT
TCTCCCCCACCCTAGCTCTGGAGGCTGCTCGTATTTGTGCCAACAAGTACATGGTGAAAA
GTTGTGGCAAAGATGGTTTTCACATCCGAGTGCGGCTACACCCCTTCCACGTCATCCGCA
TCAATAAGATGCTGTCCTGTGCCGGAGCTGACAGGTGAGCGGGGTCTTGGAGTTTTGTCT
TTATCTCGAAGCCTCCGTATCAGGCTTTTCATCAGCCAGAGCCAAGAGGCCAAGGGCTGG
GAAATGAATTTCAGTAAACACTCTCCTCCGACCACCGCACAGACGGAACAGAAGCCGCAG
AATCCCGGGAACAAAGGCAGCGCAGCTTGGGGGCAACAGGTGGAGGGTGGTCTTTCGGAG
GAGGTAGCTCATCTCTAAGCCTGATGCCATCCTTGCACACAGGCACGTAGCTGGGGTGGT
CACGGGTTGGAGGGCTTTTTCTGTGGCACCTGGCAGGGATTCTAGCCAGTCTGTTCCAGG
GTCCTCTTTGCAGCCAATTAAGCCGACCGTGCTCTTTTCCCCATGGGGGCCCGGTGTGCA
ATGGCTGCAAACAGCAGCCTCCTCGGTAGTGTATGCAGCCTGTTGCCGGTATAGGCTGCC
CTAAGGGACCTTGGAGACAGCCCTTTCCAGTGGGCAGTCATGACTGGCATGCTGTCCCCA

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               608-742, RF00156;U70; (Y11164.1/1-135) : U70 (gnl|combinedlit|LIT1472), RaveNnA 
Score=141.84

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               608-742, RF00156;U70; (Y11164.1/1-135) : U70 (gnl|combinedlit|LIT1472), RaveNnA 
Score=141.84