Non-Coding RNA Search

Ss1.1-mCP1-MI-P-CP1-nwo-g-05-0-UI.s1.3

Sequence:


               
               AGATCTCTGCCCTTCGGGCCTGCTTGAGAACTGGGGTCAGCTGCAAAATAAAGGTTTGTT
TTTCACTATTGTTCTAAAGGAGTCCTATGGGTTCCTCACACTGAAGCCAGCAAGCATGGC
CATAAACCAGAAAAATGAAAGACCCTGAAACAGACCCAGGCTGGGAAGACACTCTACATC
CTAGAAAAAATGCAGGCTGCTCAAGAGGGTCCTCCCCGTGGAACTGCTTTCCGTGGGGGC
CTGGGCGAGGGCAGCTCTCCAGGGCCCACCACCCTCTTCCACATGCACTCCCTACACCCT
GATGATGAGATGCCAGCAAGAGCCCACTTGAACCTAGCCTGAGATTCATGGAGTTTTCCC
ACCCTTTAAGTGAGATAAATTTTAGCCCCAGATGAGTCAGGACAGCCTGCTGGCTGGTGC
CCCAGGCCAAGTGCTGGGCATGCTGGGCAGGAATTCCCTCCAGGTGCCCCAAATCAGAAG
AATAGTGGCCCATCTCCCAGGCCAGGCCAACTTTGGAAGGACCGCACCCTGCCATTAGAC
CAGAACTACTTTGGGAATGAAGACGTGCTCATCTGCCAAAAATAGCCAACACCTGCATAT
TTCTGTTTTAAGGCAATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCACTTA
GAGGAAAAATTAAATTAAGTGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATCTCTGCCCTTCGGGCCTGCTTGAGAACTGGGGTCAGCTGCAAAATAAAGGTTTGTT
TTTCACTATTGTTCTAAAGGAGTCCTATGGGTTCCTCACACTGAAGCCAGCAAGCATGGC
CATAAACCAGAAAAATGAAAGACCCTGAAACAGACCCAGGCTGGGAAGACACTCTACATC
CTAGAAAAAATGCAGGCTGCTCAAGAGGGTCCTCCCCGTGGAACTGCTTTCCGTGGGGGC
CTGGGCGAGGGCAGCTCTCCAGGGCCCACCACCCTCTTCCACATGCACTCCCTACACCCT
GATGATGAGATGCCAGCAAGAGCCCACTTGAACCTAGCCTGAGATTCATGGAGTTTTCCC
ACCCTTTAAGTGAGATAAATTTTAGCCCCAGATGAGTCAGGACAGCCTGCTGGCTGGTGC
CCCAGGCCAAGTGCTGGGCATGCTGGGCAGGAATTCCCTCCAGGTGCCCCAAATCAGAAG
AATAGTGGCCCATCTCCCAGGCCAGGCCAACTTTGGAAGGACCGCACCCTGCCATTAGAC
CAGAACTACTTTGGGAATGAAGACGTGCTCATCTGCCAAAAATAGCCAACACCTGCATAT
TTCTGTTTTAAGGCAATGTTACCCTTCCATCTATCAGACGGAACAGCCCTGGGTCACTTA
GAGGAAAAATTAAATTAAGTGCTC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               198-302, - strand, RNAz p=0.966734

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               198-302, - strand, RNAz p=0.966734

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_015995, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_015995, -

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               96-684, gnl|bosTau2|chr26 (12801796-12801216)
               

               
               96-684, gnl|Hg17|chr15 (29454953-29454392)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               96-684, gnl|bosTau2|chr26 (12801796-12801216)
               

               
               96-684, gnl|Hg17|chr15 (29454953-29454392)

	96-684, gnl\|bosTau2\|chr26 (12801796-12801216)
	96-684, gnl\|Hg17\|chr15 (29454953-29454392)