Ss1.1-mCP1-MI-P-CP1-nza-l-09-0-UI.s1.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTCGGGCCCTCTGCGCGCTGCGCCCCGAGCGGCGGTCGGTGTCGGTGGTGGCGGCGGAG GCGGCGACGGTTTCGTGGCGGCCGCGCGCTGCTCTCGGAGCGGCGGGTGGCGGACGGGCC TAGGCCCTCACTCCTGACACTTCCCCTCCCCCACAGCACCGCGCTTTCTGAAGCAGACTC ATTTTGAAGATGTTTAATAAGTCATTTGGAACCCCCTTTGGGGGTGGCACAGGTGGCTTT GGCACAACTTCAACATTTGGGCAGAATACTGGATTTGGCACTACTAGTGGAGGGGCATTT GGAACATCTGCATTTGGTTCCAGCAACAATACTGGAAGCCTTTTTGGAAATTCACAGACC AAACCAGGAGGATTATTTGGTACCAATTCCTTTAGCCAGCCAGCCACTTCCACAAGCACT GGCTTTGGGTTTGGCACATCAACAGGAACATCAAACAGCTTATTTGGAACTGCAAGCACA GGGACCAGTCTTTTCTCATCCCAAAACAATGCCTTTGCACAAAATAAACCAACAGGCTTT GGGAATTTTGGAACAAGTACTAGCAGTGGGGGCCTTTTTGGAACTACAAATACCACCTCC AATCCTTTTGGTAGCACATCTGGCTCCCTCTTTGGGCCAAGTAGTTTTACAGCGGCTCCT ACTGGGACTACTATTAAATTTAACGTAAGTATTTTCTTTTAAGTCTTTGTGGAGTATGTT TCCCTCCTATATATTTCTTTGCAGAATGAATCATAAAATTTCTCCTCTTTACAGTTCTGC ACAGCTTAGTCTTACTCTTCCTGAAAGATGTGTTAAGAACAAAATCTGTGAATAGTTGTA CAGTAGATAAGTAAAGGCATGAATCATAAATCTCGATGATAATGTATATTTGAATTATGC TCAAATTACTTATATTTGTATTCACAGTGTTTGGTTACAACAGCTAGTATAAGGTTGAGC TTGTATTTACTATTTTCATAGTAAATGGCCTCTGAATGGTCAAGCCATAGAATTGTATGG GGTAAACTGTATAAAAATCATTGAAAACAGGGCCTCTTTAAGGAGATAAATGGAATAACT CAGTCAATGTTCTGTGTGCCAGTTAGAAATAAAACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTCGGGCCCTCTGCGCGCTGCGCCCCGAGCGGCGGTCGGTGTCGGTGGTGGCGGCGGAG GCGGCGACGGTTTCGTGGCGGCCGCGCGCTGCTCTCGGAGCGGCGGGTGGCGGACGGGCC TAGGCCCTCACTCCTGACACTTCCCCTCCCCCACAGCACCGCGCTTTCTGAAGCAGACTC ATTTTGAAGATGTTTAATAAGTCATTTGGAACCCCCTTTGGGGGTGGCACAGGTGGCTTT GGCACAACTTCAACATTTGGGCAGAATACTGGATTTGGCACTACTAGTGGAGGGGCATTT GGAACATCTGCATTTGGTTCCAGCAACAATACTGGAAGCCTTTTTGGAAATTCACAGACC AAACCAGGAGGATTATTTGGTACCAATTCCTTTAGCCAGCCAGCCACTTCCACAAGCACT GGCTTTGGGTTTGGCACATCAACAGGAACATCAAACAGCTTATTTGGAACTGCAAGCACA GGGACCAGTCTTTTCTCATCCCAAAACAATGCCTTTGCACAAAATAAACCAACAGGCTTT GGGAATTTTGGAACAAGTACTAGCAGTGGGGGCCTTTTTGGAACTACAAATACCACCTCC AATCCTTTTGGTAGCACATCTGGCTCCCTCTTTGGGCCAAGTAGTTTTACAGCGGCTCCT ACTGGGACTACTATTAAATTTAACGTAAGTATTTTCTTTTAAGTCTTTGTGGAGTATGTT TCCCTCCTATATATTTCTTTGCAGAATGAATCATAAAATTTCTCCTCTTTACAGTTCTGC ACAGCTTAGTCTTACTCTTCCTGAAAGATGTGTTAAGAACAAAATCTGTGAATAGTTGTA CAGTAGATAAGTAAAGGCATGAATCATAAATCTCGATGATAATGTATATTTGAATTATGC TCAAATTACTTATATTTGTATTCACAGTGTTTGGTTACAACAGCTAGTATAAGGTTGAGC TTGTATTTACTATTTTCATAGTAAATGGCCTCTGAATGGTCAAGCCATAGAATTGTATGG GGTAAACTGTATAAAAATCATTGAAAACAGGGCCTCTTTAAGGAGATAAATGGAATAACT CAGTCAATGTTCTGTGTGCCAGTTAGAAATAAAACT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 545-664, - strand, RNAz p=0.746504 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 545-664, - strand, RNAz p=0.746504 |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 1-161, gnl|bosTau2|chr15 (32903531-32903377) | |
| 1-161, gnl|canFam2|chr21 (29353681-29354187) | |
| 1-161, gnl|echTel1|scaffold_319492 (92222-91739) | |
| 1-161, gnl|hg17|chr11 (3774970-3775461) | |
| 1-161, gnl|Hg17|chr11 (3775358-3775208) | |
| 1-161, gnl|loxAfr1|scaffold_21822 (9480-8968) | |
| 1-161, gnl|mm7|chr7 (98255906-98256352) | |
| 1-161, gnl|Mm7|chr7 (98256249-98256119) | |
| 1-161, gnl|monDom2|scaffold_74 (6915379-6915861) | |
| 1-161, gnl|oryCun1|scaffold_210944 (69430-69932) | |
| 1-161, gnl|panTro1|chr9 (3917318-3917819) | |
| 1-161, gnl|rheMac2|chr14 (69748715-69748220) | |
| 1-161, gnl|rn3|chr1 (159775375-159775825) | |
| 364-544, gnl|bosTau2|chr15 (32889817-32889637) | |
| 364-544, gnl|canFam2|chr21 (29337619-29337835) | |
| 364-544, gnl|danRer3|chrNA (202114391-202114581) | |
| 364-544, gnl|dasNov1|scaffold_22303 (246-30) | |
| 364-544, gnl|echTel1|scaffold_192024 (653-881) | |
| 364-544, gnl|fr1|chrUn (296216850-296216657) | |
| 364-544, gnl|galGal2|chrUn (134054881-134054666) | |
| 364-544, gnl|hg17|chr11 (3756674-3756890) | |
| 364-544, gnl|Hg17|chr11 (3756859-3756679) | |
| 364-544, gnl|loxAfr1|scaffold_8437 (81425-81207) | |
| 364-544, gnl|mm7|chr7 (98240755-98240971) | |
| 364-544, gnl|Mm7|chr7 (98240940-98240760) | |
| 364-544, gnl|monDom2|scaffold_74 (6881726-6881945) | |
| 364-544, gnl|oryCun1|scaffold_210944 (48453-48666) | |
| 364-544, gnl|panTro1|chr9 (3898638-3898854) | |
| 364-544, gnl|rheMac2|chr14 (69767494-69767278) | |
| 364-544, gnl|rn3|chr1 (159758324-159758541) | |
| 364-544, gnl|tetNig1|chr7 (9829300-9829095) | |
| 364-544, gnl|xenTro1|scaffold_1389 (165148-165363) | |
| 545-840, gnl|bosTau2|chr15 (32888185-32887896) | |
| 545-840, gnl|Hg17|chr11 (3753827-3753542) | |
| 545-840, gnl|Mm7|chr7 (98238141-98237856) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-161, gnl|bosTau2|chr15 (32903531-32903377) | |
| 1-161, gnl|canFam2|chr21 (29353681-29354187) | |
| 1-161, gnl|echTel1|scaffold_319492 (92222-91739) | |
| 1-161, gnl|hg17|chr11 (3774970-3775461) | |
| 1-161, gnl|Hg17|chr11 (3775358-3775208) | |
| 1-161, gnl|loxAfr1|scaffold_21822 (9480-8968) | |
| 1-161, gnl|mm7|chr7 (98255906-98256352) | |
| 1-161, gnl|Mm7|chr7 (98256249-98256119) | |
| 1-161, gnl|monDom2|scaffold_74 (6915379-6915861) | |
| 1-161, gnl|oryCun1|scaffold_210944 (69430-69932) | |
| 1-161, gnl|panTro1|chr9 (3917318-3917819) | |
| 1-161, gnl|rheMac2|chr14 (69748715-69748220) | |
| 1-161, gnl|rn3|chr1 (159775375-159775825) | |
| 364-544, gnl|bosTau2|chr15 (32889817-32889637) | |
| 364-544, gnl|canFam2|chr21 (29337619-29337835) | |
| 364-544, gnl|danRer3|chrNA (202114391-202114581) | |
| 364-544, gnl|dasNov1|scaffold_22303 (246-30) | |
| 364-544, gnl|echTel1|scaffold_192024 (653-881) | |
| 364-544, gnl|fr1|chrUn (296216850-296216657) | |
| 364-544, gnl|galGal2|chrUn (134054881-134054666) | |
| 364-544, gnl|hg17|chr11 (3756674-3756890) | |
| 364-544, gnl|Hg17|chr11 (3756859-3756679) | |
| 364-544, gnl|loxAfr1|scaffold_8437 (81425-81207) | |
| 364-544, gnl|mm7|chr7 (98240755-98240971) | |
| 364-544, gnl|Mm7|chr7 (98240940-98240760) | |
| 364-544, gnl|monDom2|scaffold_74 (6881726-6881945) | |
| 364-544, gnl|oryCun1|scaffold_210944 (48453-48666) | |
| 364-544, gnl|panTro1|chr9 (3898638-3898854) | |
| 364-544, gnl|rheMac2|chr14 (69767494-69767278) | |
| 364-544, gnl|rn3|chr1 (159758324-159758541) | |
| 364-544, gnl|tetNig1|chr7 (9829300-9829095) | |
| 364-544, gnl|xenTro1|scaffold_1389 (165148-165363) | |
| 545-840, gnl|bosTau2|chr15 (32888185-32887896) | |
| 545-840, gnl|Hg17|chr11 (3753827-3753542) | |
| 545-840, gnl|Mm7|chr7 (98238141-98237856) |