Non-Coding RNA Search

Ss1.1-mE6-MI-P-E6-ahn-b-10-1-UM.s1.3

Sequence:


               
               TATTACTGACGGTGGAGGAAAAGGACAGGAGGGAACCTCAGAGTACTGACGCTGAACTGC
CAAAGGACAGACTTTCCTCAGCAGACCGTCCCCATATGAACCGCGTATTTGGAGCTACCC
TTTCCGAAAAGAAAAATGGAGAAAGTCAGGTTTTATTTGAAACAGAAATATCACGGAAGC
TCTTTGACACCCTTAATGAAGATCTTTTCCAGAAAATACTTGTACCAATTCAGCAAGTCT
TAAAAGAAGGTCACTTGGAAAAGACTGAGATTGATGAGGTGGTTTTGGTTGGGGGCTCAA
CTCGTATTCCTCGAATCCGCCAAGTCATTCAGGAGTTCTTTGGGAAGGATCCCAACACGT
CTGTAGACCCTGACCTGGCAGTGGTGACGGGAGTGGCTATCCAAGCAGGGATTGATGGAG
GCTCTTGGCCTCTCCAAGTCAGTGCTTTAGAAATTCCCAATAAGCATTTACAAAAGACCA
ACTTCAACTGAATTATGGAGGGGTGAATACATGAGATTTTGTCTGATGATCTCTTCTCCT
TTATCAGACCACCTCCATCGGCCAAATAAAGTCTCTAAAATAGCTCACAAATTTACCTAA
AAGGTAACATTTAGATATATGAAATTTTATGTAACATTTTGTTTTAGTGTTGAATGTTAC
CAGGTTGATCCTTTCTTGATTTCAGAGAGATCCCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTACTGACGGTGGAGGAAAAGGACAGGAGGGAACCTCAGAGTACTGACGCTGAACTGC
CAAAGGACAGACTTTCCTCAGCAGACCGTCCCCATATGAACCGCGTATTTGGAGCTACCC
TTTCCGAAAAGAAAAATGGAGAAAGTCAGGTTTTATTTGAAACAGAAATATCACGGAAGC
TCTTTGACACCCTTAATGAAGATCTTTTCCAGAAAATACTTGTACCAATTCAGCAAGTCT
TAAAAGAAGGTCACTTGGAAAAGACTGAGATTGATGAGGTGGTTTTGGTTGGGGGCTCAA
CTCGTATTCCTCGAATCCGCCAAGTCATTCAGGAGTTCTTTGGGAAGGATCCCAACACGT
CTGTAGACCCTGACCTGGCAGTGGTGACGGGAGTGGCTATCCAAGCAGGGATTGATGGAG
GCTCTTGGCCTCTCCAAGTCAGTGCTTTAGAAATTCCCAATAAGCATTTACAAAAGACCA
ACTTCAACTGAATTATGGAGGGGTGAATACATGAGATTTTGTCTGATGATCTCTTCTCCT
TTATCAGACCACCTCCATCGGCCAAATAAAGTCTCTAAAATAGCTCACAAATTTACCTAA
AAGGTAACATTTAGATATATGAAATTTTATGTAACATTTTGTTTTAGTGTTGAATGTTAC
CAGGTTGATCCTTTCTTGATTTCAGAGAGATCCCAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|21321621|gb|AAM47278.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|21321621|gb|AAM47278.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               360-479, - strand, RNAz p=0.960686

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               360-479, - strand, RNAz p=0.960686

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-696, gnl|bosTau2|chr1 (14755780-14756469)
               

               
               1-696, gnl|Hg17|chr21 (14668299-14667604)
               

               
               1-696, gnl|Mm7|chr16 (75755567-75754888)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-696, gnl|bosTau2|chr1 (14755780-14756469)
               

               
               1-696, gnl|Hg17|chr21 (14668299-14667604)
               

               
               1-696, gnl|Mm7|chr16 (75755567-75754888)

	1-696, gnl\|bosTau2\|chr1 (14755780-14756469)
	1-696, gnl\|Hg17\|chr21 (14668299-14667604)
	1-696, gnl\|Mm7\|chr16 (75755567-75754888)