Ss1.1-uFN-UNL-P-FN-ah-b-01-0-UNL.s1.3
|
ACTCGAGGGGGGCAGTCAGCTGAAGAAAATTCACCTTTTGAGGAGTTCTGCATCTCACCA
TCATCTGCCATCCCTGAGTGCCAAAGAAGGACTCCATGAAAGATGACAGAAGAAGTCATC
GTGATAGCCAAGTGGGACTACACGGCCCAGCAGGACCAGGAGCTGGACATCAAGAAGAAC
GAGCGCCTGTGGCTGCTGGACGACTCCAAGACATGGTGGCGGGTGCGGAACGCGGCCAAC
AGGACGGGCTATGTGCCTTCCAACTACGTGGAGCGGAAGAACAGCCTCAAGAAGGGCTCC
CTCGTGAGGAACCTCAAGGACACACTGGGCCTCGGCAGGACCCGCAGGAAGACGAGTGCG
CGCGATGCCTCGCCCACGCCCAGCACGGACGCAGAGTTCCCCGCCAACGGGGGTGGCGCC
GACCGCATCTATGACCTCAGCATCCCAGCCATAGTCAAGTTCGCATACGCGGCTGAGCGC
GAGGATGAGCTGTCGCTCGTGAAGGGCTCTCGCGTCACCGTCATGGAGAAGTGCAGCGAC
GGCTGGTGGCGGGGCAGCTACAACGGGCAGGTGGGCTGGTTCCCGTCCAACTACGTGCTG
GAGGAGCTGGAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACTCGAGGGGGGCAGTCAGCTGAAGAAAATTCACCTTTTGAGGAGTTCTGCATCTCACCA
TCATCTGCCATCCCTGAGTGCCAAAGAAGGACTCCATGAAAGATGACAGAAGAAGTCATC
GTGATAGCCAAGTGGGACTACACGGCCCAGCAGGACCAGGAGCTGGACATCAAGAAGAAC
GAGCGCCTGTGGCTGCTGGACGACTCCAAGACATGGTGGCGGGTGCGGAACGCGGCCAAC
AGGACGGGCTATGTGCCTTCCAACTACGTGGAGCGGAAGAACAGCCTCAAGAAGGGCTCC
CTCGTGAGGAACCTCAAGGACACACTGGGCCTCGGCAGGACCCGCAGGAAGACGAGTGCG
CGCGATGCCTCGCCCACGCCCAGCACGGACGCAGAGTTCCCCGCCAACGGGGGTGGCGCC
GACCGCATCTATGACCTCAGCATCCCAGCCATAGTCAAGTTCGCATACGCGGCTGAGCGC
GAGGATGAGCTGTCGCTCGTGAAGGGCTCTCGCGTCACCGTCATGGAGAAGTGCAGCGAC
GGCTGGTGGCGGGGCAGCTACAACGGGCAGGTGGGCTGGTTCCCGTCCAACTACGTGCTG
GAGGAGCTGGAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
85-329, gnl|bosTau2|chr11 (36940961-36941205) |
|
85-329, gnl|canFam2|chr10 (40746862-40746607) |
|
85-329, gnl|danRer3|chr9 (10958937-10958682) |
|
85-329, gnl|dasNov1|scaffold_4848 (132990-132735) |
|
85-329, gnl|echTel1|scaffold_308939 (8933-8678) |
|
85-329, gnl|fr1|chrUn (283595394-283595140) |
|
85-329, gnl|galGal2|chr1 (128446711-128446965) |
|
85-329, gnl|hg17|chr2 (105930017-105930272) |
|
85-329, gnl|Hg17|chr2 (105930020-105930264) |
|
85-329, gnl|loxAfr1|scaffold_95778 (3638-3893) |
|
85-329, gnl|mm7|chr1 (43773934-43774189) |
|
85-329, gnl|Mm7|chr1 (43773937-43774181) |
|
85-329, gnl|monDom2|scaffold_11 (24927425-24927680) |
|
85-329, gnl|oryCun1|scaffold_198992 (2367-2604) |
|
85-329, gnl|panTro1|chr12 (108898882-108899137) |
|
85-329, gnl|rheMac2|chr13 (105732214-105732468) |
|
85-329, gnl|rn3|chr9 (42740329-42740584) |
|
85-329, gnl|tetNig1|chr2 (9047024-9047276) |
|
85-329, gnl|xenTro1|scaffold_1892 (6966-7221) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
85-329, gnl|bosTau2|chr11 (36940961-36941205) |
|
85-329, gnl|canFam2|chr10 (40746862-40746607) |
|
85-329, gnl|danRer3|chr9 (10958937-10958682) |
|
85-329, gnl|dasNov1|scaffold_4848 (132990-132735) |
|
85-329, gnl|echTel1|scaffold_308939 (8933-8678) |
|
85-329, gnl|fr1|chrUn (283595394-283595140) |
|
85-329, gnl|galGal2|chr1 (128446711-128446965) |
|
85-329, gnl|hg17|chr2 (105930017-105930272) |
|
85-329, gnl|Hg17|chr2 (105930020-105930264) |
|
85-329, gnl|loxAfr1|scaffold_95778 (3638-3893) |
|
85-329, gnl|mm7|chr1 (43773934-43774189) |
|
85-329, gnl|Mm7|chr1 (43773937-43774181) |
|
85-329, gnl|monDom2|scaffold_11 (24927425-24927680) |
|
85-329, gnl|oryCun1|scaffold_198992 (2367-2604) |
|
85-329, gnl|panTro1|chr12 (108898882-108899137) |
|
85-329, gnl|rheMac2|chr13 (105732214-105732468) |
|
85-329, gnl|rn3|chr9 (42740329-42740584) |
|
85-329, gnl|tetNig1|chr2 (9047024-9047276) |
|
85-329, gnl|xenTro1|scaffold_1892 (6966-7221) |
