Ss1.1-uFN-UNL-P-FN-bi-b-11-0-UNL.s1.3
|
GCCTCCCTGCAGCAGCAGTTTCTGAACTAGGTGGTGCTGCGCCTCCTCCGGCACAGTGGT
GGTGAGACCTGACCTAGGTGCTGGGGCCAGGCTCTGCTGGGCGCCCTCCCTTTGCCTCCC
AGAGCTGTCGTAAGGGTCCAGTGAAGGCGTGTGCAGGTGCTTTGTAACAGGCGAGGTGCT
GTGCAAACTGAGATGGCGGTTTGGCATTCTTACGTGATGCTTTAAAGCCAGACCAGGAGG
TGGTGATCTCTGACAGCCCAGGGCGGGGCCATGGAAGCCCCCAGTATCGCTGGCAGCATT
TCAGGGAGAGCTGGGAGAAGTAAGCTTGTCTGAGAGCCACGGGCGCGGCGTGTGATACTT
TTGACCAGTGGAATGCTGTGCCTTCAGGGTTCTCGGGCCGCCACGCCGATGGCGAGAGCG
GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCCTGGGCAGCGCTGCTATTCGTGGCC
AGGCCGAGGTCGCCCGGGACCCTGCCCCGCTCCTGAGAGGCTTCCGGAAGCCAGCCACAG
GTCAGATGAAGCGCAACAGAGGGGAAGAGATAGATTTTGAGACGCCTGGGTCCATTCTCG
TCAATACCAACCTCCGGGCCCTGATCAACTCTCGGACCTTCCACGCGTTGCCGTCCCACT
TCCAGCAGCAGCTCCTCTTCCTCCTGCCTGAAGTAGACAGACAGGTGGGGACGGATGGCC
TGTTACGTCTCAGCAGCAGTGCACTGAACAACGAGTTTTTCACCACGCGGCCAGAGCTGG
CGGGACGCTGGCTGATGGNGATTCTTGGCTCGAGGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCCTCCCTGCAGCAGCAGTTTCTGAACTAGGTGGTGCTGCGCCTCCTCCGGCACAGTGGT
GGTGAGACCTGACCTAGGTGCTGGGGCCAGGCTCTGCTGGGCGCCCTCCCTTTGCCTCCC
AGAGCTGTCGTAAGGGTCCAGTGAAGGCGTGTGCAGGTGCTTTGTAACAGGCGAGGTGCT
GTGCAAACTGAGATGGCGGTTTGGCATTCTTACGTGATGCTTTAAAGCCAGACCAGGAGG
TGGTGATCTCTGACAGCCCAGGGCGGGGCCATGGAAGCCCCCAGTATCGCTGGCAGCATT
TCAGGGAGAGCTGGGAGAAGTAAGCTTGTCTGAGAGCCACGGGCGCGGCGTGTGATACTT
TTGACCAGTGGAATGCTGTGCCTTCAGGGTTCTCGGGCCGCCACGCCGATGGCGAGAGCG
GCAGCCCGTCCAGCAGCAGCAGCGGCTCTCTGGCCCTGGGCAGCGCTGCTATTCGTGGCC
AGGCCGAGGTCGCCCGGGACCCTGCCCCGCTCCTGAGAGGCTTCCGGAAGCCAGCCACAG
GTCAGATGAAGCGCAACAGAGGGGAAGAGATAGATTTTGAGACGCCTGGGTCCATTCTCG
TCAATACCAACCTCCGGGCCCTGATCAACTCTCGGACCTTCCACGCGTTGCCGTCCCACT
TCCAGCAGCAGCTCCTCTTCCTCCTGCCTGAAGTAGACAGACAGGTGGGGACGGATGGCC
TGTTACGTCTCAGCAGCAGTGCACTGAACAACGAGTTTTTCACCACGCGGCCAGAGCTGG
CGGGACGCTGGCTGATGGNGATTCTTGGCTCGAGGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
51-545, gnl|bosTau2|chr13 (42766054-42765559) |
|
51-545, gnl|canFam2|chr24 (24765691-24766077) |
|
51-545, gnl|echTel1|scaffold_281889 (1514-1905) |
|
51-545, gnl|hg17|chr20 (30480934-30481330) |
|
51-545, gnl|Hg17|chr20 (30481020-30481522) |
|
51-545, gnl|loxAfr1|scaffold_21892 (38343-38751) |
|
51-545, gnl|mm7|chr2 (153133831-153134172) |
|
51-545, gnl|Mm7|chr2 (153133920-153134363) |
|
51-545, gnl|oryCun1|scaffold_343 (2778-2417) |
|
51-545, gnl|panTro1|chr21 (32179243-32179639) |
|
51-545, gnl|rheMac2|chr10 (32148835-32148439) |
|
51-545, gnl|rn3|chr3 (143661932-143662357) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
51-545, gnl|bosTau2|chr13 (42766054-42765559) |
|
51-545, gnl|canFam2|chr24 (24765691-24766077) |
|
51-545, gnl|echTel1|scaffold_281889 (1514-1905) |
|
51-545, gnl|hg17|chr20 (30480934-30481330) |
|
51-545, gnl|Hg17|chr20 (30481020-30481522) |
|
51-545, gnl|loxAfr1|scaffold_21892 (38343-38751) |
|
51-545, gnl|mm7|chr2 (153133831-153134172) |
|
51-545, gnl|Mm7|chr2 (153133920-153134363) |
|
51-545, gnl|oryCun1|scaffold_343 (2778-2417) |
|
51-545, gnl|panTro1|chr21 (32179243-32179639) |
|
51-545, gnl|rheMac2|chr10 (32148835-32148439) |
|
51-545, gnl|rn3|chr3 (143661932-143662357) |
