Non-Coding RNA Search

Ss1.1-uFN-UNL-P-FN-bo-f-03-0-UNL.s1.3

Sequence:


               
               CGGCCGCTGTCATGGCCAGCTTGACCCTCACACTCCTGGTGTGGGGGACGGAGGTCCTGC
CACCACTGAGAAGGCTGCTGAGGGCGAACTCCACCCAGCTTCCCGTGGGAGAGGGCTCTG
GGGAGCCGGACTTCACCTTTGACGTGTCCGGGGAGAACACAGCCGGGGACGCCCTGGATC
CGGACCAGCGGAATGAGCCGCCCGTGGATCAGGGGACCACGGGGGCCTCACAGAGCCTCC
TGGATAGGAAGGAAGTGCTGGGAGGGGTCATCGCGGGCGGCCTCGTGGGGCTTATCTTTG
CCGTGTGCCTGGTGGGTTTCATGCTGTACCGGATGAAGAAGAAGGATGAGGGCAGCTACT
CCCTGGAGGAGCCGAAGCAAGCCAACGGGGGCGCCTACCAGAAGCCCAGCAGGCAGGAGG
AGTTCTACGCCTGACGGGNGCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGCCGCTGTCATGGCCAGCTTGACCCTCACACTCCTGGTGTGGGGGACGGAGGTCCTGC
CACCACTGAGAAGGCTGCTGAGGGCGAACTCCACCCAGCTTCCCGTGGGAGAGGGCTCTG
GGGAGCCGGACTTCACCTTTGACGTGTCCGGGGAGAACACAGCCGGGGACGCCCTGGATC
CGGACCAGCGGAATGAGCCGCCCGTGGATCAGGGGACCACGGGGGCCTCACAGAGCCTCC
TGGATAGGAAGGAAGTGCTGGGAGGGGTCATCGCGGGCGGCCTCGTGGGGCTTATCTTTG
CCGTGTGCCTGGTGGGTTTCATGCTGTACCGGATGAAGAAGAAGGATGAGGGCAGCTACT
CCCTGGAGGAGCCGAAGCAAGCCAACGGGGGCGCCTACCAGAAGCCCAGCAGGCAGGAGG
AGTTCTACGCCTGACGGGNGCCCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|15983068|gb|AAL11541.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|15983068|gb|AAL11541.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               302-421, + strand, RNAz p=0.764749

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               302-421, + strand, RNAz p=0.764749

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               263-440, gnl|bosTau2|chr11 (61256114-61255937)
               

               
               263-440, gnl|Hg17|chr2 (20324326-20324149)
               

               
               263-440, gnl|Mm7|chr12 (8817869-8818046)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               263-440, gnl|bosTau2|chr11 (61256114-61255937)
               

               
               263-440, gnl|Hg17|chr2 (20324326-20324149)
               

               
               263-440, gnl|Mm7|chr12 (8817869-8818046)

	263-440, gnl\|bosTau2\|chr11 (61256114-61255937)
	263-440, gnl\|Hg17\|chr2 (20324326-20324149)
	263-440, gnl\|Mm7\|chr12 (8817869-8818046)