Ss1.1-uFN-UNL-P-FN-cq-a-03-0-UNL.s1.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAGGAACTAACTTTGAAGGGAGTAACCCAGTACTATGCGTACGTAACTGAGCGCCAAAA AGTACACTGCCTCAACACACTTTTCTCCAGGCTTCAGATAAACCAGTCGATCATTTTCTG TAACTCCTCTCAGAGAGTTGAATTGCTATCTCAAGAAGATTTCTCAACTGGGTTAGGCTT GCTTCTATATCCATGCTAAAATGAGGCAGGAACATCGAAATCGTGTGTTTCATGATTTCC GAAATGGCTTATGCCGCAATCTTGTTTGCACTGATTTGTTTACCCGAGGTATTGATATAC AAGCTGTGAATGTGGTAATAAACTTTGACTTCCCAAAGCTGGCAGAGACCTATCTCCATC GAATTGGAAGATCAGGTCGCTTTGGTCATCTTGGCTTAGCCATCAACTTGATCACATATG ATGATCGCTTCAACCTGAAAAGTATTGAGGAGCAGCTGGGAACAGAAATCAAACCTATCC CAAGCAACATTGACAAGAGCTTATATGTGGCAGAATACCACAGCGAGCCTGTAGAAGATC AGAAACCTTAACAAGCTTTGTCAAACTACTGAAGGCTCGTTTGGATCTCTGACACATTGT TTTTGGGGGGATACTCTTCTCTTTGTGGGTTTTTCATCTTCTTTTATTTTGGAACTATGA AGACTTAAAGGAGCTCATTTTTTCTTTTTTTTAACTGGTGAAGAGAAAAAAGCGCAAAAG GAGTTTACCTTTTTTGTTCCACTTGTTTGCACTGTGTGCTGACTGAACATTAGTTGCACT AACTGCTGGTTTTTTTAATGTTTTCTGGGGAAGGGGGACAAGGAAGGAGAAGAAGAAGAG AAGGGGAGAAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAGGAACTAACTTTGAAGGGAGTAACCCAGTACTATGCGTACGTAACTGAGCGCCAAAA AGTACACTGCCTCAACACACTTTTCTCCAGGCTTCAGATAAACCAGTCGATCATTTTCTG TAACTCCTCTCAGAGAGTTGAATTGCTATCTCAAGAAGATTTCTCAACTGGGTTAGGCTT GCTTCTATATCCATGCTAAAATGAGGCAGGAACATCGAAATCGTGTGTTTCATGATTTCC GAAATGGCTTATGCCGCAATCTTGTTTGCACTGATTTGTTTACCCGAGGTATTGATATAC AAGCTGTGAATGTGGTAATAAACTTTGACTTCCCAAAGCTGGCAGAGACCTATCTCCATC GAATTGGAAGATCAGGTCGCTTTGGTCATCTTGGCTTAGCCATCAACTTGATCACATATG ATGATCGCTTCAACCTGAAAAGTATTGAGGAGCAGCTGGGAACAGAAATCAAACCTATCC CAAGCAACATTGACAAGAGCTTATATGTGGCAGAATACCACAGCGAGCCTGTAGAAGATC AGAAACCTTAACAAGCTTTGTCAAACTACTGAAGGCTCGTTTGGATCTCTGACACATTGT TTTTGGGGGGATACTCTTCTCTTTGTGGGTTTTTCATCTTCTTTTATTTTGGAACTATGA AGACTTAAAGGAGCTCATTTTTTCTTTTTTTTAACTGGTGAAGAGAAAAAAGCGCAAAAG GAGTTTACCTTTTTTGTTCCACTTGTTTGCACTGTGTGCTGACTGAACATTAGTTGCACT AACTGCTGGTTTTTTTAATGTTTTCTGGGGAAGGGGGACAAGGAAGGAGAAGAAGAAGAG AAGGGGAGAAAC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 372-556, + strand, RNAz p=0.929424 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 372-556, + strand, RNAz p=0.929424 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC065007, + |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 91-238, gnl|bosTau2|chr15 (14843011-14843159) | |
| 91-238, gnl|Hg17|chr11 (118133207-118133059) | |
| 91-238, gnl|Mm7|chr9 (44564368-44564517) | |
| 372-556, gnl|bosTau2|chr15 (14847192-14847376) | |
| 372-556, gnl|canFam2|chr3 (63015760-63015909) | |
| 372-556, gnl|danRer3|chr3 (36600702-36600845) | |
| 372-556, gnl|dasNov1|scaffold_87888 (453-304) | |
| 372-556, gnl|fr1|chrUn (66098428-66098577) | |
| 372-556, gnl|galGal2|chr24 (5227696-5227547) | |
| 372-556, gnl|Hg17|chr11 (118130810-118130626) | |
| 372-556, gnl|hg17|chr13 (85727354-85727503) | |
| 372-556, gnl|loxAfr1|scaffold_37266 (6161-6012) | |
| 372-556, gnl|mm7|chr2 (24187456-24187605) | |
| 372-556, gnl|Mm7|chr9 (44570024-44570208) | |
| 372-556, gnl|monDom2|scaffold_2 (119950146-119950295) | |
| 372-556, gnl|panTro1|chr14 (68469778-68469927) | |
| 372-556, gnl|rheMac2|chr17 (66702120-66702269) | |
| 372-556, gnl|rn3|chr1 (62085975-62085826) | |
| 372-556, gnl|tetNig1|chr16 (5267837-5267986) | |
| 372-556, gnl|xenTro1|scaffold_18 (54309-54160) | |
| 557-852, gnl|bosTau2|chr15 (14848406-14848697) | |
| 557-852, gnl|canFam2|chr5 (18039053-18038651) | |
| 557-852, gnl|echTel1|scaffold_237118 (6315-5938) | |
| 557-852, gnl|galGal2|chr24 (5226028-5226414) | |
| 557-852, gnl|Hg17|chr11 (118128014-118127715) | |
| 557-852, gnl|hg17|chr6 (29404971-29405376) | |
| 557-852, gnl|mm7|chr2 (24188032-24187636) | |
| 557-852, gnl|Mm7|chr9 (44570836-44571132) | |
| 557-852, gnl|monDom2|scaffold_2 (119951807-119951403) | |
| 557-852, gnl|oryCun1|scaffold_197607 (94407-94000) | |
| 557-852, gnl|panTro1|chr5 (29925016-29925421) | |
| 557-852, gnl|rheMac2|chr4 (29099492-29099900) | |
| 557-852, gnl|rn3|chr1 (62085415-62085795) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 91-238, gnl|bosTau2|chr15 (14843011-14843159) | |
| 91-238, gnl|Hg17|chr11 (118133207-118133059) | |
| 91-238, gnl|Mm7|chr9 (44564368-44564517) | |
| 372-556, gnl|bosTau2|chr15 (14847192-14847376) | |
| 372-556, gnl|canFam2|chr3 (63015760-63015909) | |
| 372-556, gnl|danRer3|chr3 (36600702-36600845) | |
| 372-556, gnl|dasNov1|scaffold_87888 (453-304) | |
| 372-556, gnl|fr1|chrUn (66098428-66098577) | |
| 372-556, gnl|galGal2|chr24 (5227696-5227547) | |
| 372-556, gnl|Hg17|chr11 (118130810-118130626) | |
| 372-556, gnl|hg17|chr13 (85727354-85727503) | |
| 372-556, gnl|loxAfr1|scaffold_37266 (6161-6012) | |
| 372-556, gnl|mm7|chr2 (24187456-24187605) | |
| 372-556, gnl|Mm7|chr9 (44570024-44570208) | |
| 372-556, gnl|monDom2|scaffold_2 (119950146-119950295) | |
| 372-556, gnl|panTro1|chr14 (68469778-68469927) | |
| 372-556, gnl|rheMac2|chr17 (66702120-66702269) | |
| 372-556, gnl|rn3|chr1 (62085975-62085826) | |
| 372-556, gnl|tetNig1|chr16 (5267837-5267986) | |
| 372-556, gnl|xenTro1|scaffold_18 (54309-54160) | |
| 557-852, gnl|bosTau2|chr15 (14848406-14848697) | |
| 557-852, gnl|canFam2|chr5 (18039053-18038651) | |
| 557-852, gnl|echTel1|scaffold_237118 (6315-5938) | |
| 557-852, gnl|galGal2|chr24 (5226028-5226414) | |
| 557-852, gnl|Hg17|chr11 (118128014-118127715) | |
| 557-852, gnl|hg17|chr6 (29404971-29405376) | |
| 557-852, gnl|mm7|chr2 (24188032-24187636) | |
| 557-852, gnl|Mm7|chr9 (44570836-44571132) | |
| 557-852, gnl|monDom2|scaffold_2 (119951807-119951403) | |
| 557-852, gnl|oryCun1|scaffold_197607 (94407-94000) | |
| 557-852, gnl|panTro1|chr5 (29925016-29925421) | |
| 557-852, gnl|rheMac2|chr4 (29099492-29099900) | |
| 557-852, gnl|rn3|chr1 (62085415-62085795) |