Ss1.1-uFN-UNL-P-FN-cy-h-08-0-UNL.s1.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGGGAAGAGTTTGTGTACCTGCGCTCCCGGAACTCACTGATGGTGAATAGCAACTACTA CATGATGGACTTCCTGAACGTTACCCCAACTCCCGTCCAGGCTGCTCGTGCAGGGAACGC GGTCCACGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATCTTTCCGACGTT GCTGATGGGAATGCGGCCCTTATGCTCTGCCCAGTATGAGAAGATATTCAACACGACGCG AATTCCTGGGGTCCACAGAGACCACATCCACCACCTCCGTGACAGCCGACACGTGGCCGT CTTCCACCGGGGCCGATTCTTCCGCGTGGGGACGCACTCCCAAAGCGGCCTGCTTTCCCC AAGGGCCCTGGAGCAGCAGTTCCAGCGAATCCTGGATGACCCCTCTCCCGCCTGCCCCCA CGAGGAGCATCTGGCGGCTCTGACCGCGGCTCCGAGGGACATGTGGGCTCAGGTGAGGAA GTCCCTAAAGACCCAGGCAGAGGAGGCCCTGGAGGCTGTGGAAGGGGCTGCTTTCTTTGT ATCACTGGACTCTGAGCCCGCGGGGGACGCTGCAGGGGACACTCCTGAGCCCTCGGGGGA CTCCGCAGCTTCCCTAGATGCCTATGCCCATGCCCTGCTGGCCGGCAGGGGCCATGACCG CTGGTTTGACAAATCCTTCTCCCTAATCATCTTCTCCAACGGGAAGCTGGGCCTCAGCGT GGAACACGCGTGGGCGGACTGCCCCATCTCAGGACACATGTGGGAGTTCACTCTGGCCAC AGAATGCTTTCAGCTGGGCTACTCGGCAGATGGTCACTGCAAGGGCCATCCTGACCCATC GCTGCCCCAGCCCCAGCGGCTGCACTGGGACCTTCCAGACAAGATCCATCTATCCATCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGGGAAGAGTTTGTGTACCTGCGCTCCCGGAACTCACTGATGGTGAATAGCAACTACTA CATGATGGACTTCCTGAACGTTACCCCAACTCCCGTCCAGGCTGCTCGTGCAGGGAACGC GGTCCACGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATCTTTCCGACGTT GCTGATGGGAATGCGGCCCTTATGCTCTGCCCAGTATGAGAAGATATTCAACACGACGCG AATTCCTGGGGTCCACAGAGACCACATCCACCACCTCCGTGACAGCCGACACGTGGCCGT CTTCCACCGGGGCCGATTCTTCCGCGTGGGGACGCACTCCCAAAGCGGCCTGCTTTCCCC AAGGGCCCTGGAGCAGCAGTTCCAGCGAATCCTGGATGACCCCTCTCCCGCCTGCCCCCA CGAGGAGCATCTGGCGGCTCTGACCGCGGCTCCGAGGGACATGTGGGCTCAGGTGAGGAA GTCCCTAAAGACCCAGGCAGAGGAGGCCCTGGAGGCTGTGGAAGGGGCTGCTTTCTTTGT ATCACTGGACTCTGAGCCCGCGGGGGACGCTGCAGGGGACACTCCTGAGCCCTCGGGGGA CTCCGCAGCTTCCCTAGATGCCTATGCCCATGCCCTGCTGGCCGGCAGGGGCCATGACCG CTGGTTTGACAAATCCTTCTCCCTAATCATCTTCTCCAACGGGAAGCTGGGCCTCAGCGT GGAACACGCGTGGGCGGACTGCCCCATCTCAGGACACATGTGGGAGTTCACTCTGGCCAC AGAATGCTTTCAGCTGGGCTACTCGGCAGATGGTCACTGCAAGGGCCATCCTGACCCATC GCTGCCCCAGCCCCAGCGGCTGCACTGGGACCTTCCAGACAAGATCCATCTATCCATCTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 338-457, - strand, RNAz p=0.650757 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 338-457, - strand, RNAz p=0.650757 |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 67-174, gnl|bosTau2|chr18 (48788946-48789053) | |
| 67-174, gnl|canFam2|chr1 (109721960-109721848) | |
| 67-174, gnl|danRer3|chr3 (27768704-27768816) | |
| 67-174, gnl|echTel1|scaffold_208179 (6876-6764) | |
| 67-174, gnl|fr1|chrUn (73504994-73505106) | |
| 67-174, gnl|hg17|chr19 (54900074-54900186) | |
| 67-174, gnl|Hg17|chr19 (54900075-54900182) | |
| 67-174, gnl|loxAfr1|scaffold_115323 (4091-3979) | |
| 67-174, gnl|mm7|chr7 (41142636-41142524) | |
| 67-174, gnl|Mm7|chr7 (41142633-41142526) | |
| 67-174, gnl|monDom2|scaffold_105 (4056436-4056324) | |
| 67-174, gnl|oryCun1|scaffold_123729 (3603-3491) | |
| 67-174, gnl|panTro1|chr20 (52263317-52263429) | |
| 67-174, gnl|rheMac2|chr19 (55980930-55981042) | |
| 67-174, gnl|rn3|chr1 (95517678-95517566) | |
| 67-174, gnl|tetNig1|chr13 (4118091-4118202) | |
| 259-457, gnl|bosTau2|chr18 (48789517-48789715) | |
| 259-457, gnl|Hg17|chr19 (54900976-54901174) | |
| 259-457, gnl|Mm7|chr7 (41141296-41141098) | |
| 660-766, gnl|bosTau2|chr18 (48790738-48790844) | |
| 660-766, gnl|canFam2|chr1 (109719706-109719583) | |
| 660-766, gnl|danRer3|chr3 (27784241-27784362) | |
| 660-766, gnl|dasNov1|scaffold_157868 (566-676) | |
| 660-766, gnl|echTel1|scaffold_208179 (5596-5481) | |
| 660-766, gnl|fr1|chrUn (73506162-73506273) | |
| 660-766, gnl|galGal2|chrUn (48492902-48492797) | |
| 660-766, gnl|hg17|chr19 (54902585-54902708) | |
| 660-766, gnl|Hg17|chr19 (54902586-54902692) | |
| 660-766, gnl|loxAfr1|scaffold_115323 (1319-1208) | |
| 660-766, gnl|mm7|chr7 (41139741-41139628) | |
| 660-766, gnl|Mm7|chr7 (41139738-41139632) | |
| 660-766, gnl|oryCun1|scaffold_175988 (43098-42986) | |
| 660-766, gnl|rheMac2|chr14 (5947351-5947462) | |
| 660-766, gnl|rn3|chr1 (95515599-95515486) | |
| 660-766, gnl|tetNig1|chr13 (4119222-4119332) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 67-174, gnl|bosTau2|chr18 (48788946-48789053) | |
| 67-174, gnl|canFam2|chr1 (109721960-109721848) | |
| 67-174, gnl|danRer3|chr3 (27768704-27768816) | |
| 67-174, gnl|echTel1|scaffold_208179 (6876-6764) | |
| 67-174, gnl|fr1|chrUn (73504994-73505106) | |
| 67-174, gnl|hg17|chr19 (54900074-54900186) | |
| 67-174, gnl|Hg17|chr19 (54900075-54900182) | |
| 67-174, gnl|loxAfr1|scaffold_115323 (4091-3979) | |
| 67-174, gnl|mm7|chr7 (41142636-41142524) | |
| 67-174, gnl|Mm7|chr7 (41142633-41142526) | |
| 67-174, gnl|monDom2|scaffold_105 (4056436-4056324) | |
| 67-174, gnl|oryCun1|scaffold_123729 (3603-3491) | |
| 67-174, gnl|panTro1|chr20 (52263317-52263429) | |
| 67-174, gnl|rheMac2|chr19 (55980930-55981042) | |
| 67-174, gnl|rn3|chr1 (95517678-95517566) | |
| 67-174, gnl|tetNig1|chr13 (4118091-4118202) | |
| 259-457, gnl|bosTau2|chr18 (48789517-48789715) | |
| 259-457, gnl|Hg17|chr19 (54900976-54901174) | |
| 259-457, gnl|Mm7|chr7 (41141296-41141098) | |
| 660-766, gnl|bosTau2|chr18 (48790738-48790844) | |
| 660-766, gnl|canFam2|chr1 (109719706-109719583) | |
| 660-766, gnl|danRer3|chr3 (27784241-27784362) | |
| 660-766, gnl|dasNov1|scaffold_157868 (566-676) | |
| 660-766, gnl|echTel1|scaffold_208179 (5596-5481) | |
| 660-766, gnl|fr1|chrUn (73506162-73506273) | |
| 660-766, gnl|galGal2|chrUn (48492902-48492797) | |
| 660-766, gnl|hg17|chr19 (54902585-54902708) | |
| 660-766, gnl|Hg17|chr19 (54902586-54902692) | |
| 660-766, gnl|loxAfr1|scaffold_115323 (1319-1208) | |
| 660-766, gnl|mm7|chr7 (41139741-41139628) | |
| 660-766, gnl|Mm7|chr7 (41139738-41139632) | |
| 660-766, gnl|oryCun1|scaffold_175988 (43098-42986) | |
| 660-766, gnl|rheMac2|chr14 (5947351-5947462) | |
| 660-766, gnl|rn3|chr1 (95515599-95515486) | |
| 660-766, gnl|tetNig1|chr13 (4119222-4119332) |