Ss1.1-uFN-UNL-P-FN-db-b-01-0-UNL.s1.3
|
AACCCTATGCATTATGTGGGCCTGAGGAGTTAGGTACTGGTGTCACCTCCTCCAGGGATA
CCTCCCGGACTCACCCCTAGGCCTTTCCTGGGCTTCTCAATGAGCCCTGGGGCTGCTGTT
TGTCAGCCCCTCGAGTGCCTCTGGGGTAGATATTTCACCTCTGACCCCAGCCCTCAGCAC
AGGGCCCATCTTTTGAGTCAAATTGCACCCTAGGTGCAGGATAGGAAAGCCTCACTTCCA
GCTGGAGCGATCTGGAAGGCTGCCTGGGGGGTGGTGGCACTAGAGTTGAGCCTGCAGATT
TCTCTCAGGGGAGGTGACAGGGCCCAGCGCAGGCCATGGGGAGGAAGTAGCCTCTGTTTC
CTGTGGGAAAGTGGTGCGGGTAGAAAAGAAATGTAGGCTGAGGTTCACTGCGGAGACTGC
TGAGGTGTTCTAGGCAAACCAGCTTTTTTCTAGAATGTTCCCAAAGGCATCTAAGAAGCT
CCCTGAGGTGGACAGTCAGCTTGGCTTTGGTGAGGATTCCAGTCCCTGGACTCCTAGGGG
CTCCTGGAGGCACCCAAGGAGCATCTCAGCAACAGTCAGGATGTGCTGAGGGAGGCCGAG
GAGTCGCCTGCATGCCAGGGCCTCCTGTCCCCACCAGAGGGGAACCTGGTTTCCCGGGGG
ATGACATCTGATAAAGGCACTCGGGTGTTCGCTTCCCGGAAAGGCTTTCAGGTCAGAGGG
GTTCGAGAGCGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AACCCTATGCATTATGTGGGCCTGAGGAGTTAGGTACTGGTGTCACCTCCTCCAGGGATA
CCTCCCGGACTCACCCCTAGGCCTTTCCTGGGCTTCTCAATGAGCCCTGGGGCTGCTGTT
TGTCAGCCCCTCGAGTGCCTCTGGGGTAGATATTTCACCTCTGACCCCAGCCCTCAGCAC
AGGGCCCATCTTTTGAGTCAAATTGCACCCTAGGTGCAGGATAGGAAAGCCTCACTTCCA
GCTGGAGCGATCTGGAAGGCTGCCTGGGGGGTGGTGGCACTAGAGTTGAGCCTGCAGATT
TCTCTCAGGGGAGGTGACAGGGCCCAGCGCAGGCCATGGGGAGGAAGTAGCCTCTGTTTC
CTGTGGGAAAGTGGTGCGGGTAGAAAAGAAATGTAGGCTGAGGTTCACTGCGGAGACTGC
TGAGGTGTTCTAGGCAAACCAGCTTTTTTCTAGAATGTTCCCAAAGGCATCTAAGAAGCT
CCCTGAGGTGGACAGTCAGCTTGGCTTTGGTGAGGATTCCAGTCCCTGGACTCCTAGGGG
CTCCTGGAGGCACCCAAGGAGCATCTCAGCAACAGTCAGGATGTGCTGAGGGAGGCCGAG
GAGTCGCCTGCATGCCAGGGCCTCCTGTCCCCACCAGAGGGGAACCTGGTTTCCCGGGGG
ATGACATCTGATAAAGGCACTCGGGTGTTCGCTTCCCGGAAAGGCTTTCAGGTCAGAGGG
GTTCGAGAGCGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
206-632, gnl|bosTau2|chr16 (40693649-40694082) |
|
206-632, gnl|canFam2|chr2 (86761881-86761348) |
|
206-632, gnl|echTel1|scaffold_321580 (335708-336292) |
|
206-632, gnl|hg17|chr1 (12564489-12565141) |
|
206-632, gnl|Hg17|chr1 (12564721-12565155) |
|
206-632, gnl|loxAfr1|scaffold_31483 (5380-4747) |
|
206-632, gnl|panTro1|chr1_random (10033329-10033982) |
|
206-632, gnl|rheMac2|chr1 (15689412-15690059) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
206-632, gnl|bosTau2|chr16 (40693649-40694082) |
|
206-632, gnl|canFam2|chr2 (86761881-86761348) |
|
206-632, gnl|echTel1|scaffold_321580 (335708-336292) |
|
206-632, gnl|hg17|chr1 (12564489-12565141) |
|
206-632, gnl|Hg17|chr1 (12564721-12565155) |
|
206-632, gnl|loxAfr1|scaffold_31483 (5380-4747) |
|
206-632, gnl|panTro1|chr1_random (10033329-10033982) |
|
206-632, gnl|rheMac2|chr1 (15689412-15690059) |
