Non-Coding RNA Search

Ss1.1-unkn-AR078A11iTHYEA11S.5

Sequence:


               
               NTGCTAATGCAGCAGCAGCAGGAGTTCCCAGGGACGGGTGAGAGAACACTTGAGAGAAGG
CAGACATATGTGACTGGGACACGTTACTCAGCCTGGAGGCTGATCCTCCTTTAGGAATAA
ACTCGCTNGCAGTAGGATTTGGTGTCTGTAAATTGTTTTCTGTGACTCTNTCCACCAAAC
CATATTGATGGGTACTCCTGATTTACACCTGTCAGCAAGGCAGCCAATAGGGTTCTTTGC
TTTTCGTGCCTTTGATCCCATCGGAACTAGCCTCTCCTCCAGCATCCCCAGGCGATACTT
CCTTGGCTTTCTTCTCTGAGAGATGTTGAGGGCACCAAAGTCATTAAACAAGGATGAAGC
AGGTGAAATTAGAGGATCATGGCCTGCATATGGCTTGGCACTGTCATTTAAAAGGCTTGG
GGAGCTGCTACTATTAGTCATTCTCTGCATCAAGGGATACTTTGTTTCTACGGGGCTTCC
AAATCCATTAACTCCAATAAAGCTGGTGCTGAAATAGGAATCTGTGAGACTCGATTCAGT
TAAAGCTCCTCCATCTATTCCAGGAATTGCCAGCCGCGGTCCGTCGAGGACCCCGCTGCC
GCCTCCGCCGCCGACCGCCGCTCCTGCCCCCGGGCCCCCCAGGTCCGGCTTCTTGGGCCC
GGGGGGCGGCCCGGCTCCCCCGCCCGGGACCGCTCCAGGCGGAAAGCCGGCCCCGGGCGC
GCCCGCCAGAGCCAGGGGGACGCTGTTGCTATGGAGGCCGAGGCCCGGGGCAGCTCCGCG
CCGAGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               NTGCTAATGCAGCAGCAGCAGGAGTTCCCAGGGACGGGTGAGAGAACACTTGAGAGAAGG
CAGACATATGTGACTGGGACACGTTACTCAGCCTGGAGGCTGATCCTCCTTTAGGAATAA
ACTCGCTNGCAGTAGGATTTGGTGTCTGTAAATTGTTTTCTGTGACTCTNTCCACCAAAC
CATATTGATGGGTACTCCTGATTTACACCTGTCAGCAAGGCAGCCAATAGGGTTCTTTGC
TTTTCGTGCCTTTGATCCCATCGGAACTAGCCTCTCCTCCAGCATCCCCAGGCGATACTT
CCTTGGCTTTCTTCTCTGAGAGATGTTGAGGGCACCAAAGTCATTAAACAAGGATGAAGC
AGGTGAAATTAGAGGATCATGGCCTGCATATGGCTTGGCACTGTCATTTAAAAGGCTTGG
GGAGCTGCTACTATTAGTCATTCTCTGCATCAAGGGATACTTTGTTTCTACGGGGCTTCC
AAATCCATTAACTCCAATAAAGCTGGTGCTGAAATAGGAATCTGTGAGACTCGATTCAGT
TAAAGCTCCTCCATCTATTCCAGGAATTGCCAGCCGCGGTCCGTCGAGGACCCCGCTGCC
GCCTCCGCCGCCGACCGCCGCTCCTGCCCCCGGGCCCCCCAGGTCCGGCTTCTTGGGCCC
GGGGGGCGGCCCGGCTCCCCCGCCCGGGACCGCTCCAGGCGGAAAGCCGGCCCCGGGCGC
GCCCGCCAGAGCCAGGGGGACGCTGTTGCTATGGAGGCCGAGGCCCGGGGCAGCTCCGCG
CCGAGCGGCCGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q5T515_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5T515_HUMAN

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               146-308, gnl|bosTau2|chr12 (15299603-15299440)
               

               
               146-308, gnl|canFam2|chr25 (14499244-14498630)
               

               
               146-308, gnl|dasNov1|scaffold_9192 (15766-15149)
               

               
               146-308, gnl|galGal2|chr1 (167997999-167997403)
               

               
               146-308, gnl|hg17|chr13 (27668914-27669541)
               

               
               146-308, gnl|Hg17|chr13 (27669483-27669320)
               

               
               146-308, gnl|mm7|chr5 (146360991-146361552)
               

               
               146-308, gnl|Mm7|chr5 (146361501-146361338)
               

               
               146-308, gnl|monDom2|scaffold_15 (37461942-37462541)
               

               
               146-308, gnl|panTro1|chr14 (26850888-26851515)
               

               
               146-308, gnl|rheMac2|chr17 (7836833-7837460)
               

               
               146-308, gnl|rn3|chr12 (8159963-8159387)
               


               
               567-681, gnl|bosTau2|chr12 (17346606-17346492)
               

               
               567-681, gnl|Hg17|chr13 (27611224-27611110)

Aligned organism(s): 14 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               146-308, gnl|bosTau2|chr12 (15299603-15299440)
               

               
               146-308, gnl|canFam2|chr25 (14499244-14498630)
               

               
               146-308, gnl|dasNov1|scaffold_9192 (15766-15149)
               

               
               146-308, gnl|galGal2|chr1 (167997999-167997403)
               

               
               146-308, gnl|hg17|chr13 (27668914-27669541)
               

               
               146-308, gnl|Hg17|chr13 (27669483-27669320)
               

               
               146-308, gnl|mm7|chr5 (146360991-146361552)
               

               
               146-308, gnl|Mm7|chr5 (146361501-146361338)
               

               
               146-308, gnl|monDom2|scaffold_15 (37461942-37462541)
               

               
               146-308, gnl|panTro1|chr14 (26850888-26851515)
               

               
               146-308, gnl|rheMac2|chr17 (7836833-7837460)
               

               
               146-308, gnl|rn3|chr12 (8159963-8159387)
               


               
               567-681, gnl|bosTau2|chr12 (17346606-17346492)
               

               
               567-681, gnl|Hg17|chr13 (27611224-27611110)

	146-308, gnl\|bosTau2\|chr12 (15299603-15299440)
	146-308, gnl\|canFam2\|chr25 (14499244-14498630)
	146-308, gnl\|dasNov1\|scaffold_9192 (15766-15149)
	146-308, gnl\|galGal2\|chr1 (167997999-167997403)
	146-308, gnl\|hg17\|chr13 (27668914-27669541)
	146-308, gnl\|Hg17\|chr13 (27669483-27669320)
	146-308, gnl\|mm7\|chr5 (146360991-146361552)
	146-308, gnl\|Mm7\|chr5 (146361501-146361338)
	146-308, gnl\|monDom2\|scaffold_15 (37461942-37462541)
	146-308, gnl\|panTro1\|chr14 (26850888-26851515)
	146-308, gnl\|rheMac2\|chr17 (7836833-7837460)
	146-308, gnl\|rn3\|chr12 (8159963-8159387)

	567-681, gnl\|bosTau2\|chr12 (17346606-17346492)
	567-681, gnl\|Hg17\|chr13 (27611224-27611110)