Ss1.1-unkn-AR098A09SPEH06R.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTATCCCCCAACTGCACCTCACGTTGCTTACATGCAGCCGAAAGCAAATGCCCCTTCCTT CTTCATGGCCGATGAGCTCCGACAGGAGCTCATTAACAGACACTTAATAACGATGGCTCA AATTGATCAAGCAGATATGCCAGCAGTCCCTACAGAAGTTGACAGCTACCATAGCCTATT CCCTCTAGAACCACTGCCACCACCCAACCGGATACAGAAATCAAGTAATTTTGGCTACAT CACGTCTTGCTACAAAGCTGTAAACAGCAAAGATGATCTGCCGTATTGCCTTCGGAGGAT ACACGGTTTTCGTCTTGTTAACACAAAGTGCATGGTATTGGTTGATATGTGGAAAAAAAT TCAGCACTCAAATATTGTAACCTTGCGGGAAGTATTTACCACTAAAGCTTTCTCAGAGCC TTCTCTTGTGTTTGCCTATGATTTCCATGCTGGAGGAGAGACCATGATGAGCAGGCACTT CAATGACCCGAACGCTGATGCCTATTTCACAAAGAGGAAATGGGGTCAGCATGATGGGCC CTTGCCCAGACAGCATGCTGGGTTATTGCCAGAATCTCTTATTTGGGCATATATTGTCCA ACTGAGTTCTGCATTACGAACCATTCATACAGCGGGTTTGGCGTGTCGAGTTATGGACCC AACAAAGATTCTGATAACCCGGCAAAACGAGGTTGCGAGTAAATTGTGTCGGAGTTTTTG ATGTTTTAACATTTTGATAACCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTATCCCCCAACTGCACCTCACGTTGCTTACATGCAGCCGAAAGCAAATGCCCCTTCCTT CTTCATGGCCGATGAGCTCCGACAGGAGCTCATTAACAGACACTTAATAACGATGGCTCA AATTGATCAAGCAGATATGCCAGCAGTCCCTACAGAAGTTGACAGCTACCATAGCCTATT CCCTCTAGAACCACTGCCACCACCCAACCGGATACAGAAATCAAGTAATTTTGGCTACAT CACGTCTTGCTACAAAGCTGTAAACAGCAAAGATGATCTGCCGTATTGCCTTCGGAGGAT ACACGGTTTTCGTCTTGTTAACACAAAGTGCATGGTATTGGTTGATATGTGGAAAAAAAT TCAGCACTCAAATATTGTAACCTTGCGGGAAGTATTTACCACTAAAGCTTTCTCAGAGCC TTCTCTTGTGTTTGCCTATGATTTCCATGCTGGAGGAGAGACCATGATGAGCAGGCACTT CAATGACCCGAACGCTGATGCCTATTTCACAAAGAGGAAATGGGGTCAGCATGATGGGCC CTTGCCCAGACAGCATGCTGGGTTATTGCCAGAATCTCTTATTTGGGCATATATTGTCCA ACTGAGTTCTGCATTACGAACCATTCATACAGCGGGTTTGGCGTGTCGAGTTATGGACCC AACAAAGATTCTGATAACCCGGCAAAACGAGGTTGCGAGTAAATTGTGTCGGAGTTTTTG ATGTTTTAACATTTTGATAACCAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 524-682, + strand, RNAz p=0.84721 | |
| 524-633, + strand, RNAz p=0.807187 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 524-682, + strand, RNAz p=0.84721 | |
| 524-633, + strand, RNAz p=0.807187 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC024318, + |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 142-307, gnl|bosTau2|chr12 (14900315-14900480) | |
| 142-307, gnl|canFam2|chr25 (14430856-14430737) | |
| 142-307, gnl|danRer3|chr24 (18895919-18896028) | |
| 142-307, gnl|echTel1|scaffold_309091 (48991-49111) | |
| 142-307, gnl|fr1|chrUn (57893252-57893136) | |
| 142-307, gnl|galGal2|chr1 (167980692-167980573) | |
| 142-307, gnl|hg17|chr13 (27738834-27738953) | |
| 142-307, gnl|Hg17|chr13 (27738850-27739015) | |
| 142-307, gnl|loxAfr1|scaffold_24 (149145-149026) | |
| 142-307, gnl|mm7|chr5 (146420905-146421024) | |
| 142-307, gnl|Mm7|chr5 (146420921-146421086) | |
| 142-307, gnl|monDom2|scaffold_15 (37528966-37529085) | |
| 142-307, gnl|panTro1|chr14 (26920517-26920636) | |
| 142-307, gnl|rheMac2|chr17 (7909428-7909547) | |
| 142-307, gnl|rn3|chr12 (8096069-8095950) | |
| 142-307, gnl|tetNig1|chr6 (2700422-2700313) | |
| 142-307, gnl|xenTro1|scaffold_449 (804068-804178) | |
| 524-693, gnl|bosTau2|chr12 (14904921-14905089) | |
| 524-693, gnl|canFam2|chr25 (14426218-14426038) | |
| 524-693, gnl|danRer3|chr24 (18901255-18901435) | |
| 524-693, gnl|echTel1|scaffold_229294 (2662-2841) | |
| 524-693, gnl|fr1|chrUn (57891430-57891254) | |
| 524-693, gnl|galGal2|chr1 (167972636-167972461) | |
| 524-693, gnl|hg17|chr13 (27742828-27743008) | |
| 524-693, gnl|Hg17|chr13 (27742837-27743005) | |
| 524-693, gnl|loxAfr1|scaffold_24 (145064-144884) | |
| 524-693, gnl|mm7|chr5 (146424357-146424529) | |
| 524-693, gnl|Mm7|chr5 (146424358-146424526) | |
| 524-693, gnl|monDom2|scaffold_15 (37535644-37535824) | |
| 524-693, gnl|oryCun1|scaffold_198574 (3876-4056) | |
| 524-693, gnl|panTro1|chr14 (26924506-26924686) | |
| 524-693, gnl|rheMac2|chr17 (7913542-7913722) | |
| 524-693, gnl|rn3|chr12 (8092843-8092663) | |
| 524-693, gnl|tetNig1|chr6 (2698844-2698671) | |
| 524-693, gnl|xenTro1|scaffold_449 (808755-808932) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 142-307, gnl|bosTau2|chr12 (14900315-14900480) | |
| 142-307, gnl|canFam2|chr25 (14430856-14430737) | |
| 142-307, gnl|danRer3|chr24 (18895919-18896028) | |
| 142-307, gnl|echTel1|scaffold_309091 (48991-49111) | |
| 142-307, gnl|fr1|chrUn (57893252-57893136) | |
| 142-307, gnl|galGal2|chr1 (167980692-167980573) | |
| 142-307, gnl|hg17|chr13 (27738834-27738953) | |
| 142-307, gnl|Hg17|chr13 (27738850-27739015) | |
| 142-307, gnl|loxAfr1|scaffold_24 (149145-149026) | |
| 142-307, gnl|mm7|chr5 (146420905-146421024) | |
| 142-307, gnl|Mm7|chr5 (146420921-146421086) | |
| 142-307, gnl|monDom2|scaffold_15 (37528966-37529085) | |
| 142-307, gnl|panTro1|chr14 (26920517-26920636) | |
| 142-307, gnl|rheMac2|chr17 (7909428-7909547) | |
| 142-307, gnl|rn3|chr12 (8096069-8095950) | |
| 142-307, gnl|tetNig1|chr6 (2700422-2700313) | |
| 142-307, gnl|xenTro1|scaffold_449 (804068-804178) | |
| 524-693, gnl|bosTau2|chr12 (14904921-14905089) | |
| 524-693, gnl|canFam2|chr25 (14426218-14426038) | |
| 524-693, gnl|danRer3|chr24 (18901255-18901435) | |
| 524-693, gnl|echTel1|scaffold_229294 (2662-2841) | |
| 524-693, gnl|fr1|chrUn (57891430-57891254) | |
| 524-693, gnl|galGal2|chr1 (167972636-167972461) | |
| 524-693, gnl|hg17|chr13 (27742828-27743008) | |
| 524-693, gnl|Hg17|chr13 (27742837-27743005) | |
| 524-693, gnl|loxAfr1|scaffold_24 (145064-144884) | |
| 524-693, gnl|mm7|chr5 (146424357-146424529) | |
| 524-693, gnl|Mm7|chr5 (146424358-146424526) | |
| 524-693, gnl|monDom2|scaffold_15 (37535644-37535824) | |
| 524-693, gnl|oryCun1|scaffold_198574 (3876-4056) | |
| 524-693, gnl|panTro1|chr14 (26924506-26924686) | |
| 524-693, gnl|rheMac2|chr17 (7913542-7913722) | |
| 524-693, gnl|rn3|chr12 (8092843-8092663) | |
| 524-693, gnl|tetNig1|chr6 (2698844-2698671) | |
| 524-693, gnl|xenTro1|scaffold_449 (808755-808932) |