Ss1.1-unkn-BJP602768645.R1.5
|
AAAGAAAAAACTTTTTGAAAACATTTGCAGTTAAAGGAGAGAAAAAGAAAAAAGAAAATG
AGAGAAGGAAATACTAAGACATAAAGCAAGTATTAGTTTGTGTAAAAAGGCAACTAGATT
CCCAACTCATTCTAGGAGGTCAATATTTTCCAGTGTTAAAGCCAGGCAAAAATAACCACA
AAAAAAGAAAACTACAGTCAAATAGCTCATGTAACAGAAATACTTAAATGAAATATTAGT
AAACCATCTCATAACAAAAAAAGGATTATACACCATGGAGGGGAGAAAAGTAGCTATGCA
GGAGTCCCCTGGTGGTTCAGGCAGTTAAGGATCTGGCACTGGTGTGGCTGCGGCACGGTT
CAGTCCCTGGCCTGGGAACTTCAGTGTGCTGAGAGCAACCAAAATAAAAAGAAGTAGCTA
TCCAGAAAAAACCCATCCAACCAGCAAAGTTACGTTGGTGGCATAAAGGTTGGTTGGGCT
GGCTTCTGTCCTCTCGCCCTTCCCCAGTCCCAGACCAGACATAAAAACACACACCAGCAG
GCACAGGTGTTTGCAGTGCCACTTTATTGCTGATAGCTGACATTGCCTGGGGCTAGTGAA
AATAAATTACAACTATGGTAGCATCTGACAGGTACGGCTAAGCTGGAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAGAAAAAACTTTTTGAAAACATTTGCAGTTAAAGGAGAGAAAAAGAAAAAAGAAAATG
AGAGAAGGAAATACTAAGACATAAAGCAAGTATTAGTTTGTGTAAAAAGGCAACTAGATT
CCCAACTCATTCTAGGAGGTCAATATTTTCCAGTGTTAAAGCCAGGCAAAAATAACCACA
AAAAAAGAAAACTACAGTCAAATAGCTCATGTAACAGAAATACTTAAATGAAATATTAGT
AAACCATCTCATAACAAAAAAAGGATTATACACCATGGAGGGGAGAAAAGTAGCTATGCA
GGAGTCCCCTGGTGGTTCAGGCAGTTAAGGATCTGGCACTGGTGTGGCTGCGGCACGGTT
CAGTCCCTGGCCTGGGAACTTCAGTGTGCTGAGAGCAACCAAAATAAAAAGAAGTAGCTA
TCCAGAAAAAACCCATCCAACCAGCAAAGTTACGTTGGTGGCATAAAGGTTGGTTGGGCT
GGCTTCTGTCCTCTCGCCCTTCCCCAGTCCCAGACCAGACATAAAAACACACACCAGCAG
GCACAGGTGTTTGCAGTGCCACTTTATTGCTGATAGCTGACATTGCCTGGGGCTAGTGAA
AATAAATTACAACTATGGTAGCATCTGACAGGTACGGCTAAGCTGGAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
55-278, gnl|bosTau2|chr5 (11419504-11419275) |
|
55-278, gnl|canFam2|chr15 (34848795-34849166) |
|
55-278, gnl|dasNov1|scaffold_2068 (51312-51636) |
|
55-278, gnl|hg17|chr12 (90045097-90045434) |
|
55-278, gnl|Hg17|chr12 (90045261-90045492) |
|
55-278, gnl|loxAfr1|scaffold_10263 (72501-72868) |
|
55-278, gnl|panTro1|chr10 (92212479-92212818) |
|
55-278, gnl|rheMac2|chr11 (92346394-92346729) |
| |
|
420-648, gnl|bosTau2|chr19 (32367590-32367814) |
|
420-648, gnl|Hg17|chr17 (35138818-35139037) |
|
420-648, gnl|Mm7|chr11 (98546640-98546858) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
55-278, gnl|bosTau2|chr5 (11419504-11419275) |
|
55-278, gnl|canFam2|chr15 (34848795-34849166) |
|
55-278, gnl|dasNov1|scaffold_2068 (51312-51636) |
|
55-278, gnl|hg17|chr12 (90045097-90045434) |
|
55-278, gnl|Hg17|chr12 (90045261-90045492) |
|
55-278, gnl|loxAfr1|scaffold_10263 (72501-72868) |
|
55-278, gnl|panTro1|chr10 (92212479-92212818) |
|
55-278, gnl|rheMac2|chr11 (92346394-92346729) |
| |
|
420-648, gnl|bosTau2|chr19 (32367590-32367814) |
|
420-648, gnl|Hg17|chr17 (35138818-35139037) |
|
420-648, gnl|Mm7|chr11 (98546640-98546858) |
