Non-Coding RNA Search

Ss1.1-unkn-PIGEST29A.5

Sequence:


               
               GAATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAGGGCCGAGGATTTTTATT
TTCATGCCCAAGCCAGNACAGACCTGGCAGACAGAAGTACCATAGGGAAAAGAGGGAAGG
CAGTGTCAGATGGAGCTGGACCCTGTGCCAGGAGGGTAGCCAGGGCCAGGCCAGGAGGAG
GTTCAGTCCAGGGGGAGGAAAGGGATGGGTAGCAAAGGTCAAGTTTGAAGTCACGGTCTC
CAACCAAGGCCAGTCACTCAATACCCTGGGGTCTGCCTTTCTCAACATCATGTGGCCCCA
CGACATTGCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAGGGCCGAGGATTTTTATT
TTCATGCCCAAGCCAGNACAGACCTGGCAGACAGAAGTACCATAGGGAAAAGAGGGAAGG
CAGTGTCAGATGGAGCTGGACCCTGTGCCAGGAGGGTAGCCAGGGCCAGGCCAGGAGGAG
GTTCAGTCCAGGGGGAGGAAAGGGATGGGTAGCAAAGGTCAAGTTTGAAGTCACGGTCTC
CAACCAAGGCCAGTCACTCAATACCCTGGGGTCTGCCTTTCTCAACATCATGTGGCCCCA
CGACATTGCCAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               66-184, + strand, RNAz p=0.949027

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               66-184, + strand, RNAz p=0.949027

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               26-210, gnl|bosTau2|chr1 (62140051-62139869)
               

               
               26-210, gnl|Hg17|chr5 (176849850-176850008)
               

               
               26-210, gnl|Mm7|chr13 (54594683-54594849)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-210, gnl|bosTau2|chr1 (62140051-62139869)
               

               
               26-210, gnl|Hg17|chr5 (176849850-176850008)
               

               
               26-210, gnl|Mm7|chr13 (54594683-54594849)

	26-210, gnl\|bosTau2\|chr1 (62140051-62139869)
	26-210, gnl\|Hg17\|chr5 (176849850-176850008)
	26-210, gnl\|Mm7\|chr13 (54594683-54594849)