Non-Coding RNA Search

Ss1.1-unkn-c08h06.5

Sequence:


               
               TATGGCCTTTTA------------------------------------TAGAGNCAACAG
CATTTAATGGTCANAAACAGTTGTTCANTATTATTACCAGCCATANAANCTGTGCTGGAG
GACAGGACCCATCCCTTCCCCACACCAGGCAAAGCA------------AGCTGGCACGTG
GCTGGGCCCAGGTCCTCATCCTCATGGNCTGAGGGGAGACCACCATNTAATATCCCCCAG
CTACCACTNTACTCTTTANAGGAGGGGTGTAAGCCCCACATGCAANAANAACCCCTTGCC
CCCAGTGTCAAATGGGATGGGGAT------------GTTAAGGGGAAACCCTGTNTAAGG
NGTTAACGGAGTTCAAAGGGGTAGGGATTACCCCTGTTCTCCATCTNCCAAAGGTGCTCA
CTTTCCAGCTTTTTCATCCGTTCATCAATGTTGGCAAAATTCCCCTCAACTGTGGACAGG
TTTTCACGCATCGTTGTCTGCACC------------GTGGTGTTGTCCTTAAGGGAACAA
AGCGATCATTTGCTGTGTGGGATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATGGCCTTTTA------------------------------------TAGAGNCAACAG
CATTTAATGGTCANAAACAGTTGTTCANTATTATTACCAGCCATANAANCTGTGCTGGAG
GACAGGACCCATCCCTTCCCCACACCAGGCAAAGCA------------AGCTGGCACGTG
GCTGGGCCCAGGTCCTCATCCTCATGGNCTGAGGGGAGACCACCATNTAATATCCCCCAG
CTACCACTNTACTCTTTANAGGAGGGGTGTAAGCCCCACATGCAANAANAACCCCTTGCC
CCCAGTGTCAAATGGGATGGGGAT------------GTTAAGGGGAAACCCTGTNTAAGG
NGTTAACGGAGTTCAAAGGGGTAGGGATTACCCCTGTTCTCCATCTNCCAAAGGTGCTCA
CTTTCCAGCTTTTTCATCCGTTCATCAATGTTGGCAAAATTCCCCTCAACTGTGGACAGG
TTTTCACGCATCGTTGTCTGCACC------------GTGGTGTTGTCCTTAAGGGAACAA
AGCGATCATTTGCTGTGTGGGATC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               94-441, - strand, RNAz p=0.998946

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               94-441, - strand, RNAz p=0.998946

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of BC000718, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of BC000718, -

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               14-444, gnl|bosTau2|chr5 (34764326-34763882)
               

               
               14-444, gnl|Hg17|chr12 (56210362-56210826)
               

               
               14-444, gnl|Mm7|chr10 (126783200-126782796)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-444, gnl|bosTau2|chr5 (34764326-34763882)
               

               
               14-444, gnl|Hg17|chr12 (56210362-56210826)
               

               
               14-444, gnl|Mm7|chr10 (126783200-126782796)

	14-444, gnl\|bosTau2\|chr5 (34764326-34763882)
	14-444, gnl\|Hg17\|chr12 (56210362-56210826)
	14-444, gnl\|Mm7\|chr10 (126783200-126782796)