Tes1-TES01A040064
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GCAGACTATTATAATATCTCCATTATCATAAAATGATATAGATTGCATTGAGAACCTAAA
AGGATACACGCCAAACTGTTAGCAGTTGTTACTTCTGTGGACATCCATTTCCATTTATGA
TGAGTAATAGAGACTGAGTTTACCTTCCAACCGTAAATGCCTTCACAACTGAACAAAATG
TGGGAAACAAAGGTTTTTCAGACATTGGACAACAGACAGTGCAAGAGAGTAAGTCTTGAG
AGAAAGGAAATAAACAAGATGCACCCCATGATTGTTTTAGCTTACTACCTGGAGAGAGTT
TTCAGGCTACAGTACAGGGAAGGGGGAAGAGCCCTGTGGTATCACTGAGGAGACACAGGT
TAGAGTTCAGGGAAACCAAGACAGCTAAAATTTGTTGGGCTGCACAACAGAAGAGAAAGC
TGCATAGAGAACTCTGGAATTCTGCAGGGGATCCTGTTAGGCCATTGAGTACTAATGTGC
ACTTGCGTATGAGGAAATGACCCAAAGCCTGGGAAAGAACCACTGGAGAGGAGAAGGCAT
AACAATCCCTGGTGCTCATATAGAG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCAGACTATTATAATATCTCCATTATCATAAAATGATATAGATTGCATTGAGAACCTAAA
AGGATACACGCCAAACTGTTAGCAGTTGTTACTTCTGTGGACATCCATTTCCATTTATGA
TGAGTAATAGAGACTGAGTTTACCTTCCAACCGTAAATGCCTTCACAACTGAACAAAATG
TGGGAAACAAAGGTTTTTCAGACATTGGACAACAGACAGTGCAAGAGAGTAAGTCTTGAG
AGAAAGGAAATAAACAAGATGCACCCCATGATTGTTTTAGCTTACTACCTGGAGAGAGTT
TTCAGGCTACAGTACAGGGAAGGGGGAAGAGCCCTGTGGTATCACTGAGGAGACACAGGT
TAGAGTTCAGGGAAACCAAGACAGCTAAAATTTGTTGGGCTGCACAACAGAAGAGAAAGC
TGCATAGAGAACTCTGGAATTCTGCAGGGGATCCTGTTAGGCCATTGAGTACTAATGTGC
ACTTGCGTATGAGGAAATGACCCAAAGCCTGGGAAAGAACCACTGGAGAGGAGAAGGCAT
AACAATCCCTGGTGCTCATATAGAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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91-238, gnl|bosTau2|chr3 (4719672-4719820) |
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91-238, gnl|canFam2|chr38 (24894496-24894319) |
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91-238, gnl|hg17|chr1 (157123901-157124111) |
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91-238, gnl|Hg17|chr1 (157124068-157123900) |
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91-238, gnl|loxAfr1|scaffold_9646 (35379-35176) |
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91-238, gnl|mm7|chr1 (172056238-172056044) |
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91-238, gnl|oryCun1|scaffold_209093 (44402-44215) |
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91-238, gnl|panTro1|chr1 (139204017-139204227) |
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91-238, gnl|rheMac2|chr1 (138959332-138959504) |
| |
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248-565, gnl|bosTau2|chr3 (4720338-4720657) |
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248-565, gnl|Hg17|chr1 (157123888-157123574) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
91-238, gnl|bosTau2|chr3 (4719672-4719820) |
|
91-238, gnl|canFam2|chr38 (24894496-24894319) |
|
91-238, gnl|hg17|chr1 (157123901-157124111) |
|
91-238, gnl|Hg17|chr1 (157124068-157123900) |
|
91-238, gnl|loxAfr1|scaffold_9646 (35379-35176) |
|
91-238, gnl|mm7|chr1 (172056238-172056044) |
|
91-238, gnl|oryCun1|scaffold_209093 (44402-44215) |
|
91-238, gnl|panTro1|chr1 (139204017-139204227) |
|
91-238, gnl|rheMac2|chr1 (138959332-138959504) |
| |
|
248-565, gnl|bosTau2|chr3 (4720338-4720657) |
|
248-565, gnl|Hg17|chr1 (157123888-157123574) |
