Tes1-TES01A110046
|
GGGTATAGGTGGATACCACGGTGCCTAACTTGGCGTCTCTGATGCTTCGGAGAAGTCACG
CTCCCAGTGCATGGTGAATGTGGTCTGGCTTCCCCCACTGCTCGGTAGAGACCCCTGCAG
GATTGGTACGGCCTGGACACCTCATGCACAGCCTTCCCCACCAGGGACACAGGCTCTCTG
GACGGAGAGGCCGTTCCTTGGCCTCAGGGCTGTGGATACTGTTCTTTCCACTTCTTCCCA
CTTTTCTCCACCCTGGGAGGCTGGTACACAGGCTAGGAAGCCCAGGCAGGGTGCATGGAT
GTCCCCCAAGGATGGTGGGGGTGTTCCTGTCCTGTGTCCAGGCTCTGGGGCCGTCGGACA
CCCGCTCAGACACCCCAGGCTGGATCACGGCTCTTATCTCTGTGGCTGCCTCCCTTTTCC
CCATCCTTTGTGAGTCACACGCCTTGGCATCTCGTGTGACAAAGGTCATTAGTAGAGAAG
ACTTGGGCCTTCCATGCGTGACATCTTGTCATCCACACAGTTTATTGTTTTGGACCCTCC
CCTCTTGTAATTCTGTGAGGTGACAGATCAGTTTTTAATGGGCTACACTGTGTCAAGGGA
GAGTTTAAATTAACCTTAAGACTTTTTATACCTCACAGGGCCCCTCACATCATAAGCCGT
GGTCAGTATTTGAAGAGAGGGAGTGGGTGCTTTTTACTAAGGCTTTTGACATCATCTGTC
AAGCCTGTCTGTCTCTCGGTGTCGTGATGTCTCTGTTTCTCCGAGTACTTTCCTATTCTC
GGCTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGGTATAGGTGGATACCACGGTGCCTAACTTGGCGTCTCTGATGCTTCGGAGAAGTCACG
CTCCCAGTGCATGGTGAATGTGGTCTGGCTTCCCCCACTGCTCGGTAGAGACCCCTGCAG
GATTGGTACGGCCTGGACACCTCATGCACAGCCTTCCCCACCAGGGACACAGGCTCTCTG
GACGGAGAGGCCGTTCCTTGGCCTCAGGGCTGTGGATACTGTTCTTTCCACTTCTTCCCA
CTTTTCTCCACCCTGGGAGGCTGGTACACAGGCTAGGAAGCCCAGGCAGGGTGCATGGAT
GTCCCCCAAGGATGGTGGGGGTGTTCCTGTCCTGTGTCCAGGCTCTGGGGCCGTCGGACA
CCCGCTCAGACACCCCAGGCTGGATCACGGCTCTTATCTCTGTGGCTGCCTCCCTTTTCC
CCATCCTTTGTGAGTCACACGCCTTGGCATCTCGTGTGACAAAGGTCATTAGTAGAGAAG
ACTTGGGCCTTCCATGCGTGACATCTTGTCATCCACACAGTTTATTGTTTTGGACCCTCC
CCTCTTGTAATTCTGTGAGGTGACAGATCAGTTTTTAATGGGCTACACTGTGTCAAGGGA
GAGTTTAAATTAACCTTAAGACTTTTTATACCTCACAGGGCCCCTCACATCATAAGCCGT
GGTCAGTATTTGAAGAGAGGGAGTGGGTGCTTTTTACTAAGGCTTTTGACATCATCTGTC
AAGCCTGTCTGTCTCTCGGTGTCGTGATGTCTCTGTTTCTCCGAGTACTTTCCTATTCTC
GGCTC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
3-205, gnl|bosTau2|chr26 (22414387-22414585) |
|
3-205, gnl|canFam2|chr28 (27096455-27096751) |
|
3-205, gnl|dasNov1|scaffold_164 (91367-91026) |
|
3-205, gnl|hg17|chr10 (114845129-114845428) |
|
3-205, gnl|Hg17|chr10 (114845244-114845405) |
|
3-205, gnl|loxAfr1|scaffold_63 (213775-213433) |
|
3-205, gnl|mm7|chr19 (55782177-55782334) |
|
3-205, gnl|oryCun1|scaffold_199828 (131050-131284) |
|
3-205, gnl|panTro1|chr8 (116953214-116953513) |
|
3-205, gnl|rheMac2|chr9 (112756654-112756952) |
|
3-205, gnl|rn3|chr1 (262370151-262370329) |
| |
|
229-774, gnl|bosTau2|chr26 (22414632-22415203) |
|
229-774, gnl|Hg17|chr10 (114845458-114846000) |
|
229-774, gnl|Mm7|chr19 (55782374-55782931) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-205, gnl|bosTau2|chr26 (22414387-22414585) |
|
3-205, gnl|canFam2|chr28 (27096455-27096751) |
|
3-205, gnl|dasNov1|scaffold_164 (91367-91026) |
|
3-205, gnl|hg17|chr10 (114845129-114845428) |
|
3-205, gnl|Hg17|chr10 (114845244-114845405) |
|
3-205, gnl|loxAfr1|scaffold_63 (213775-213433) |
|
3-205, gnl|mm7|chr19 (55782177-55782334) |
|
3-205, gnl|oryCun1|scaffold_199828 (131050-131284) |
|
3-205, gnl|panTro1|chr8 (116953214-116953513) |
|
3-205, gnl|rheMac2|chr9 (112756654-112756952) |
|
3-205, gnl|rn3|chr1 (262370151-262370329) |
| |
|
229-774, gnl|bosTau2|chr26 (22414632-22415203) |
|
229-774, gnl|Hg17|chr10 (114845458-114846000) |
|
229-774, gnl|Mm7|chr19 (55782374-55782931) |
