Tes1-TES01B020094
|
GGTGTGCAGGCCACCTACAGAGAGGCGGAAGGGAGAGAGGGGCAGAGGCTGGCATGAAGC
TGGGGCCTTGGAGGTCTGTGCCCAACCTCGCCCGCCAGAGGCGCACGATCCCACCGGCCC
CGCCCATCTCAGGTGGAGCTGGTTGCCCTCTCTGCCAGAAGCGGCCCCCCACCCCAGGTG
GGGCTCATAGGGTGGGCCTGGCGTGGGCGGGACGCGGCGAGAGACTTGGGAACGGGGGCT
GGGCTGAGCTGGGCTGAGCGAGATGGAGGCCGAGCCAACCCCGGATTTTATGCTCCGAGA
GCTGCAGGCACCGCCCTGTTTGCACCCCGAGCCTCCCCCAGGAACCCCTGCCCAGAACGC
ACCAAGGACCCCAGGATGCTTCAGACCCAGTGGCAGGTCCTTCTGGTCTGCACACCAGGA
CTCTGTCACTGCCCTGCACTTCCTCCAAGAGACAGCAGAGGGTCTGGCCCAGCCCCCCGC
CTGGGACACCCAGGCCCAGGGGCCCTGCTGGGAGCCAAAGGCCCTGAGGACTCCGGGACC
CTTACCTCTGGCCAAGGATGCCAAGAACATGCTGAGCCACAGCCCAGGGCCCCCAGAGGC
TCCCCCAGCCTCTTCCGCCCAGCCACAGAGAAAGCCCAGAAAGCAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GGTGTGCAGGCCACCTACAGAGAGGCGGAAGGGAGAGAGGGGCAGAGGCTGGCATGAAGC
TGGGGCCTTGGAGGTCTGTGCCCAACCTCGCCCGCCAGAGGCGCACGATCCCACCGGCCC
CGCCCATCTCAGGTGGAGCTGGTTGCCCTCTCTGCCAGAAGCGGCCCCCCACCCCAGGTG
GGGCTCATAGGGTGGGCCTGGCGTGGGCGGGACGCGGCGAGAGACTTGGGAACGGGGGCT
GGGCTGAGCTGGGCTGAGCGAGATGGAGGCCGAGCCAACCCCGGATTTTATGCTCCGAGA
GCTGCAGGCACCGCCCTGTTTGCACCCCGAGCCTCCCCCAGGAACCCCTGCCCAGAACGC
ACCAAGGACCCCAGGATGCTTCAGACCCAGTGGCAGGTCCTTCTGGTCTGCACACCAGGA
CTCTGTCACTGCCCTGCACTTCCTCCAAGAGACAGCAGAGGGTCTGGCCCAGCCCCCCGC
CTGGGACACCCAGGCCCAGGGGCCCTGCTGGGAGCCAAAGGCCCTGAGGACTCCGGGACC
CTTACCTCTGGCCAAGGATGCCAAGAACATGCTGAGCCACAGCCCAGGGCCCCCAGAGGC
TCCCCCAGCCTCTTCCGCCCAGCCACAGAGAAAGCCCAGAAAGCAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
151-283, - strand, RNAmicro p=0.939276 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
151-283, - strand, RNAmicro p=0.939276 |
Human gene identifier and UTR site,
human gene reading direction
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21-398, gnl|bosTau2|chr7 (9505332-9505711) |
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21-398, gnl|canFam2|chr20 (53806116-53805855) |
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21-398, gnl|hg17|chr19 (10281000-10281260) |
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21-398, gnl|loxAfr1|scaffold_85417 (32964-33218) |
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21-398, gnl|mm7|chr9 (20943471-20943797) |
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21-398, gnl|Mm7|chr9 (20943886-20943496) |
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21-398, gnl|monDom2|scaffold_106 (1995661-1995969) |
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21-398, gnl|panTro1|chr20 (10667972-10668232) |
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21-398, gnl|rheMac2|chr19 (10121630-10121889) |
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21-398, gnl|rn3|chr8 (20090819-20091150) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
21-398, gnl|bosTau2|chr7 (9505332-9505711) |
|
21-398, gnl|canFam2|chr20 (53806116-53805855) |
|
21-398, gnl|hg17|chr19 (10281000-10281260) |
|
21-398, gnl|loxAfr1|scaffold_85417 (32964-33218) |
|
21-398, gnl|mm7|chr9 (20943471-20943797) |
|
21-398, gnl|Mm7|chr9 (20943886-20943496) |
|
21-398, gnl|monDom2|scaffold_106 (1995661-1995969) |
|
21-398, gnl|panTro1|chr20 (10667972-10668232) |
|
21-398, gnl|rheMac2|chr19 (10121630-10121889) |
|
21-398, gnl|rn3|chr8 (20090819-20091150) |
