Non-Coding RNA Search

Tes1-TES01B080012

Sequence:


               
               CTTATTGAAAATGCCATGAAATCCACACTTGCAAAGTGTATAATCCAGCGGATTTTTTGT
TTATTCACAGAGTTGCGCGACCATGACCACTAATGCCAGAATGTTTTCATCACCCAAAAA
GAAAATCCATTTCCGTTAGGCAGTCATTTTCTTTTCCCATCCCAGCCCTGGACACAGCGA
AGTATTTTCTGTCCGATGGCTCTGCCTATTCCAGCATTTCCTAAGCTCAGAATCATCAAA
GGGAGTCTCTTGGATCTGGCTTCTTTGCTTCCTTCTTATGGCTGAATAATAATCCATTCA
ATGGGTATACCCCATTTCCATTTTCCCTCAATTGATGAATGTTTTTGGATTTTTACCACT
TTTTGGCTATTATGAATACCGCTGTGAACATCCGTGTTCACTTTTTTTGCGTGGATGGTT
TGTTTTGAGCTCCTAGATACATACCAAGGAGTGGAACTCCTGAGCCAAAAATATCACGTT
TTAGTTTTGTGCTGGTAATTTGAAGTAAACAGATGTTTAGATATAAGATTGGAAATTGGC
ACAGTGGATATTGCTCACGGCTGCAGCTGAAGAACTGAGCAACCCTTCTCTTTTCTTCCC
TCTGGAGAGGGAGGCTTGATCTGTGTGCCTTCAGAAGACACAGGGCTTGGCGCCAGGCTA
CTGCAGATGTGAATCCATTTGGGGCGGTTTAGCGACCCCACCCCCGTTTGCTGCCGGGAG
CTCTGGGTCTTTGCCCACACCTGCTGCCTGGGCAGTCTCTTCCCTTATTCCCAGGTTGTT
GACCCAGGACCCTGGACACTTTTGGGATTGTCTGGCTTTCCTTTTGCTTTTATTAGCTGC
TATTCTGCTGTGTCTGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTATTGAAAATGCCATGAAATCCACACTTGCAAAGTGTATAATCCAGCGGATTTTTTGT
TTATTCACAGAGTTGCGCGACCATGACCACTAATGCCAGAATGTTTTCATCACCCAAAAA
GAAAATCCATTTCCGTTAGGCAGTCATTTTCTTTTCCCATCCCAGCCCTGGACACAGCGA
AGTATTTTCTGTCCGATGGCTCTGCCTATTCCAGCATTTCCTAAGCTCAGAATCATCAAA
GGGAGTCTCTTGGATCTGGCTTCTTTGCTTCCTTCTTATGGCTGAATAATAATCCATTCA
ATGGGTATACCCCATTTCCATTTTCCCTCAATTGATGAATGTTTTTGGATTTTTACCACT
TTTTGGCTATTATGAATACCGCTGTGAACATCCGTGTTCACTTTTTTTGCGTGGATGGTT
TGTTTTGAGCTCCTAGATACATACCAAGGAGTGGAACTCCTGAGCCAAAAATATCACGTT
TTAGTTTTGTGCTGGTAATTTGAAGTAAACAGATGTTTAGATATAAGATTGGAAATTGGC
ACAGTGGATATTGCTCACGGCTGCAGCTGAAGAACTGAGCAACCCTTCTCTTTTCTTCCC
TCTGGAGAGGGAGGCTTGATCTGTGTGCCTTCAGAAGACACAGGGCTTGGCGCCAGGCTA
CTGCAGATGTGAATCCATTTGGGGCGGTTTAGCGACCCCACCCCCGTTTGCTGCCGGGAG
CTCTGGGTCTTTGCCCACACCTGCTGCCTGGGCAGTCTCTTCCCTTATTCCCAGGTTGTT
GACCCAGGACCCTGGACACTTTTGGGATTGTCTGGCTTTCCTTTTGCTTTTATTAGCTGC
TATTCTGCTGTGTCTGTGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               311-462, + strand, RNAz p=0.99966

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               311-462, + strand, RNAz p=0.99966

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of AF447876, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of AF447876, +

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               104-627, gnl|bosTau2|chr25 (28873102-28872570)
               

               
               104-627, gnl|Hg17|chr7 (73711605-73711044)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               104-627, gnl|bosTau2|chr25 (28873102-28872570)
               

               
               104-627, gnl|Hg17|chr7 (73711605-73711044)

	104-627, gnl\|bosTau2\|chr25 (28873102-28872570)
	104-627, gnl\|Hg17\|chr7 (73711605-73711044)