Non-Coding RNA Search

Tes1-TES01C080045

Sequence:


               
               GGTTTTTGGAGACAGAATTTTTAGAGAAACAGAAGAGTACCGGTTTTAATGATCGGGTTT
GGGGTTGCTTTTTTCTGTATGTGTGTGATAGCCTGACTTTTGATAGTGTATGTGTATGTT
TTAATACAATCCAGTTACCATGAAAATCAATCAATGTTTGACTTCCATTGTATTTAATTA
TGTGCTTTAGCTTTACTGTGTAGGCCGGTGTTCACTTTGGGAGGACAGTGTTGTAAATCA
GATATAGCTCACAGAATTTCTAAGTAGACCTTTGCTTAGATAGTGCATCTGTAGAGCTTG
GTATCTCATTACTTAATTTATGACATCTTTTAGATGCTTGGAGTTGGCTAATCATACATG
GGTATGTGTATCTGTGTTTCCTCCTGTATTTGAGAAATGTATTTTAAAGCAGCTGATGAT
TCCAAGGGGTGAAGGAAATGTTATTGCTAGAGGCAGTTACATCAAAATCGTAATCTGGGC
CTCTACAGATTTCTCTAGAGTTTGGAAAGAGGGTGAAAAGATTCACAATAGTGGGTTCTT
AGAGTGTAGCTATTGTTGAGCAACAGCTCTGTGCCCCATTGCTCTGTACCGTGTCTTGAT
CAAAGCATGTGATTACCACTCCCACACTCCATTTTACAGATGGGGAAAGAAAGCCGCAGG
GAAGTGAAGCAACCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTTTTGGAGACAGAATTTTTAGAGAAACAGAAGAGTACCGGTTTTAATGATCGGGTTT
GGGGTTGCTTTTTTCTGTATGTGTGTGATAGCCTGACTTTTGATAGTGTATGTGTATGTT
TTAATACAATCCAGTTACCATGAAAATCAATCAATGTTTGACTTCCATTGTATTTAATTA
TGTGCTTTAGCTTTACTGTGTAGGCCGGTGTTCACTTTGGGAGGACAGTGTTGTAAATCA
GATATAGCTCACAGAATTTCTAAGTAGACCTTTGCTTAGATAGTGCATCTGTAGAGCTTG
GTATCTCATTACTTAATTTATGACATCTTTTAGATGCTTGGAGTTGGCTAATCATACATG
GGTATGTGTATCTGTGTTTCCTCCTGTATTTGAGAAATGTATTTTAAAGCAGCTGATGAT
TCCAAGGGGTGAAGGAAATGTTATTGCTAGAGGCAGTTACATCAAAATCGTAATCTGGGC
CTCTACAGATTTCTCTAGAGTTTGGAAAGAGGGTGAAAAGATTCACAATAGTGGGTTCTT
AGAGTGTAGCTATTGTTGAGCAACAGCTCTGTGCCCCATTGCTCTGTACCGTGTCTTGAT
CAAAGCATGTGATTACCACTCCCACACTCCATTTTACAGATGGGGAAAGAAAGCCGCAGG
GAAGTGAAGCAACCTGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               406-560, - strand, RNAz p=0.98528

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               406-560, - strand, RNAz p=0.98528

Aligned organism(s): 11 entry(ies)

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Aligned organism(s): 11 entry(ies)

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               1-563, gnl|bosTau2|chr26 (7086808-7087373)
               

               
               1-563, gnl|canFam2|chr28 (7526187-7526621)
               

               
               1-563, gnl|echTel1|scaffold_309092 (118114-117515)
               

               
               1-563, gnl|hg17|chr10 (91389951-91390358)
               

               
               1-563, gnl|Hg17|chr10 (91390524-91389965)
               

               
               1-563, gnl|loxAfr1|scaffold_2818 (81818-82237)
               

               
               1-563, gnl|mm7|chr19 (34570304-34570698)
               

               
               1-563, gnl|monDom2|scaffold_14 (33191845-33191481)
               

               
               1-563, gnl|panTro1|chr8 (93087808-93088223)
               

               
               1-563, gnl|rheMac2|chr9 (89183543-89183948)
               

               
               1-563, gnl|rn3|chr1 (239013838-239014265)

Aligned organism(s): 11 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-563, gnl|bosTau2|chr26 (7086808-7087373)
               

               
               1-563, gnl|canFam2|chr28 (7526187-7526621)
               

               
               1-563, gnl|echTel1|scaffold_309092 (118114-117515)
               

               
               1-563, gnl|hg17|chr10 (91389951-91390358)
               

               
               1-563, gnl|Hg17|chr10 (91390524-91389965)
               

               
               1-563, gnl|loxAfr1|scaffold_2818 (81818-82237)
               

               
               1-563, gnl|mm7|chr19 (34570304-34570698)
               

               
               1-563, gnl|monDom2|scaffold_14 (33191845-33191481)
               

               
               1-563, gnl|panTro1|chr8 (93087808-93088223)
               

               
               1-563, gnl|rheMac2|chr9 (89183543-89183948)
               

               
               1-563, gnl|rn3|chr1 (239013838-239014265)

	1-563, gnl\|bosTau2\|chr26 (7086808-7087373)
	1-563, gnl\|canFam2\|chr28 (7526187-7526621)
	1-563, gnl\|echTel1\|scaffold_309092 (118114-117515)
	1-563, gnl\|hg17\|chr10 (91389951-91390358)
	1-563, gnl\|Hg17\|chr10 (91390524-91389965)
	1-563, gnl\|loxAfr1\|scaffold_2818 (81818-82237)
	1-563, gnl\|mm7\|chr19 (34570304-34570698)
	1-563, gnl\|monDom2\|scaffold_14 (33191845-33191481)
	1-563, gnl\|panTro1\|chr8 (93087808-93088223)
	1-563, gnl\|rheMac2\|chr9 (89183543-89183948)
	1-563, gnl\|rn3\|chr1 (239013838-239014265)