Non-Coding RNA Search

Tes1-TES01C100086

Sequence:


               
               TCCCTAATAATTCCTCTCTTCCTTAGAATGAAGGCAAGGCCACGTGAGGTTTGTGGCTAG
ACCCAAGAAAGGTCTTTCCATCTGTGGTGGTAGCAAGGAGCGAGGAGATAAGGGATAGAG
GACTCGGAGTGTCCCGTGCCCCCGACACCTGCATTTCTGAACCTAGCATGTGGTCTCTGC
GGAGAGGCTCAGGGCTGGTTGATAAGTCCTCTCCAGGAACCTGTGGCTCTTGCCTCCTTT
TTATTTCCCAGGCTGGAGGTGAGAGGGTGCCCTCTAGTGTCTAGATGGAGAATTTAGGAT
TCAAGAACCAGCGCATCCTCTGGACCTCCAACCCCAGCTGCCCGCAAAAAGGGGCCAGGG
AGGAGGAAGGAGCCTGAGACCTACGCAGGAGATAGAGATCCCAAGTCCAAAAATCTCCAT
GGGGGGGTCCCAGGGCCTAGAGAATTCCTAGGCAGAAGGATCTCAGCCCCTCCTATGGCT
GTTTTTCTTCCCTGTCTGGCAGACATCTATCCCTCCCTGTGCACATTAAATGTTTGGGCC
CCACTATTTATGGGGATGAAAAATAGCCAggagttcccatggtggctcagtggttaacaa
acccaactaggatccatgaggatgcaggtttgatccttggcctcactcagtgngttaagg
atccggtgttgctatgagct

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCCTAATAATTCCTCTCTTCCTTAGAATGAAGGCAAGGCCACGTGAGGTTTGTGGCTAG
ACCCAAGAAAGGTCTTTCCATCTGTGGTGGTAGCAAGGAGCGAGGAGATAAGGGATAGAG
GACTCGGAGTGTCCCGTGCCCCCGACACCTGCATTTCTGAACCTAGCATGTGGTCTCTGC
GGAGAGGCTCAGGGCTGGTTGATAAGTCCTCTCCAGGAACCTGTGGCTCTTGCCTCCTTT
TTATTTCCCAGGCTGGAGGTGAGAGGGTGCCCTCTAGTGTCTAGATGGAGAATTTAGGAT
TCAAGAACCAGCGCATCCTCTGGACCTCCAACCCCAGCTGCCCGCAAAAAGGGGCCAGGG
AGGAGGAAGGAGCCTGAGACCTACGCAGGAGATAGAGATCCCAAGTCCAAAAATCTCCAT
GGGGGGGTCCCAGGGCCTAGAGAATTCCTAGGCAGAAGGATCTCAGCCCCTCCTATGGCT
GTTTTTCTTCCCTGTCTGGCAGACATCTATCCCTCCCTGTGCACATTAAATGTTTGGGCC
CCACTATTTATGGGGATGAAAAATAGCCAggagttcccatggtggctcagtggttaacaa
acccaactaggatccatgaggatgcaggtttgatccttggcctcactcagtgngttaagg
atccggtgttgctatgagct

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               238-354, - strand, RNAz p=0.983229

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               238-354, - strand, RNAz p=0.983229

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-569, gnl|bosTau2|chr19 (32283121-32283690)
               

               
               1-569, gnl|Mm7|chr11 (98464698-98465253)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-569, gnl|bosTau2|chr19 (32283121-32283690)
               

               
               1-569, gnl|Mm7|chr11 (98464698-98465253)

	1-569, gnl\|bosTau2\|chr19 (32283121-32283690)
	1-569, gnl\|Mm7\|chr11 (98464698-98465253)