Tes1-TES01D070009
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACGCCGGCCGTCTGCCGCAGCATGGATGTGATCTACCCCCTGGCGGTGCCCAAGGGTCGC AGGCTCTGCTGTGAGGTGTGCGAAGCCCCGGCCGAGCGGGTGTGCGGGGCCTGCACAGTC ACATATTACTGTGGTGTGGTTCATCAGAGAGCTGACTGGCGCAGCATCCATGAGAAGATA TGTCAGCTGCTGATTCCCCTGCGCACGTCCAGGCCCTTCTACAACTCGGAGGAAGAGCGG CAGCACGGCCTGCAGCAGCTGCAGCGGCGCCAGAAGCACTTGATTGAATTCTGCTACACT GTAGCCCAGAAATACCTCTTTGAAGGAAAATACGAAGCTGCTGTTCCAGCAGCTTTGCAC TCTCTTCGCTTCCGCATGAACGTGCATGGCCTGAGTTCAGTCGAGCTGGTGCCTGCCTAC CTGCTGTTGGCCGAGGCGAGCCTTGGTCTGGGCCGCGTCGTCCAGGCTGAGGAGTACCTG TCTCAAGCGCAGTGGACAGTCCTCAAATCAACTGAATGCAGTTACGCCACCCAGTCTTTA CTGCATCGGAACCTGGGACTTGTCTGCATGGCCAAGGGAAACTGTGAGGAAGCCCGGGAC CACCTGGCCAATGATATTTATTTTGCCAGTTGTGCATTTGGGACAGAGCACATCAGGACC TCAGGAGGCTACTTCCACCTGGCTAACATCTTCCACGGCCTACAAAAGTTGGACCTGGCA GACACACTGTACACCAAGGTCCCTGAGATCTGGAGTAAATATTTGAACGATCGCTGTGAA GCCCTCTCCCAGGCTCGCATCCAACAACTAGATCTCCTGGGCAAACGATTTGAAACGGAC ACCGGCTTGGATGAAGCCCAGGAAGCAGAAGCCATTCAGATCCTGACTTCAATCTTGACC ATCCGAGAAGCTACATCTGACAGAGCCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACGCCGGCCGTCTGCCGCAGCATGGATGTGATCTACCCCCTGGCGGTGCCCAAGGGTCGC AGGCTCTGCTGTGAGGTGTGCGAAGCCCCGGCCGAGCGGGTGTGCGGGGCCTGCACAGTC ACATATTACTGTGGTGTGGTTCATCAGAGAGCTGACTGGCGCAGCATCCATGAGAAGATA TGTCAGCTGCTGATTCCCCTGCGCACGTCCAGGCCCTTCTACAACTCGGAGGAAGAGCGG CAGCACGGCCTGCAGCAGCTGCAGCGGCGCCAGAAGCACTTGATTGAATTCTGCTACACT GTAGCCCAGAAATACCTCTTTGAAGGAAAATACGAAGCTGCTGTTCCAGCAGCTTTGCAC TCTCTTCGCTTCCGCATGAACGTGCATGGCCTGAGTTCAGTCGAGCTGGTGCCTGCCTAC CTGCTGTTGGCCGAGGCGAGCCTTGGTCTGGGCCGCGTCGTCCAGGCTGAGGAGTACCTG TCTCAAGCGCAGTGGACAGTCCTCAAATCAACTGAATGCAGTTACGCCACCCAGTCTTTA CTGCATCGGAACCTGGGACTTGTCTGCATGGCCAAGGGAAACTGTGAGGAAGCCCGGGAC CACCTGGCCAATGATATTTATTTTGCCAGTTGTGCATTTGGGACAGAGCACATCAGGACC TCAGGAGGCTACTTCCACCTGGCTAACATCTTCCACGGCCTACAAAAGTTGGACCTGGCA GACACACTGTACACCAAGGTCCCTGAGATCTGGAGTAAATATTTGAACGATCGCTGTGAA GCCCTCTCCCAGGCTCGCATCCAACAACTAGATCTCCTGGGCAAACGATTTGAAACGGAC ACCGGCTTGGATGAAGCCCAGGAAGCAGAAGCCATTCAGATCCTGACTTCAATCTTGACC ATCCGAGAAGCTACATCTGACAGAGCCCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 271-447, - strand, RNAz p=0.852047 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 271-447, - strand, RNAz p=0.852047 |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 8-131, gnl|bosTau2|chr11 (42527227-42527104) | |
| 8-131, gnl|canFam2|chr15 (3817155-3816981) | |
| 8-131, gnl|dasNov1|scaffold_13504 (18711-18538) | |
| 8-131, gnl|echTel1|scaffold_285225 (46140-46310) | |
| 8-131, gnl|hg17|chr1 (42590633-42590806) | |
| 8-131, gnl|Hg17|chr1 (42590775-42590652) | |
| 8-131, gnl|mm7|chr4 (118799455-118799282) | |
| 8-131, gnl|Mm7|chr4 (118799311-118799434) | |
| 8-131, gnl|monDom2|scaffold_43 (4218330-4218200) | |
| 8-131, gnl|panTro1|chr1 (43560662-43560835) | |
| 8-131, gnl|rheMac2|chr1 (45349151-45349324) | |
| 8-131, gnl|rn3|chr5 (140018187-140018014) | |
| 8-131, gnl|xenTro1|scaffold_225 (963279-963102) | |
| 271-447, gnl|bosTau2|chr11 (42513867-42513691) | |
| 271-447, gnl|Hg17|chr1 (42583405-42583229) | |
| 271-447, gnl|Mm7|chr4 (118813516-118813692) | |
| 616-740, gnl|bosTau2|chr11 (42499338-42499214) | |
| 616-740, gnl|canFam2|chr15 (3837811-3837698) | |
| 616-740, gnl|dasNov1|scaffold_13504 (49490-49381) | |
| 616-740, gnl|echTel1|scaffold_300011 (8884-8996) | |
| 616-740, gnl|galGal2|chr21 (6165227-6165115) | |
| 616-740, gnl|hg17|chr1 (42571180-42571293) | |
| 616-740, gnl|Hg17|chr1 (42571307-42571183) | |
| 616-740, gnl|mm7|chr4 (118821328-118821215) | |
| 616-740, gnl|Mm7|chr4 (118821199-118821323) | |
| 616-740, gnl|monDom2|scaffold_43 (4236531-4236418) | |
| 616-740, gnl|oryCun1|scaffold_181742 (41149-41036) | |
| 616-740, gnl|panTro1|chr1 (43541150-43541263) | |
| 616-740, gnl|rheMac2|chr1 (45331339-45331452) | |
| 616-740, gnl|rn3|chr5 (140041714-140041601) | |
| 616-740, gnl|xenTro1|scaffold_225 (970832-970720) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 8-131, gnl|bosTau2|chr11 (42527227-42527104) | |
| 8-131, gnl|canFam2|chr15 (3817155-3816981) | |
| 8-131, gnl|dasNov1|scaffold_13504 (18711-18538) | |
| 8-131, gnl|echTel1|scaffold_285225 (46140-46310) | |
| 8-131, gnl|hg17|chr1 (42590633-42590806) | |
| 8-131, gnl|Hg17|chr1 (42590775-42590652) | |
| 8-131, gnl|mm7|chr4 (118799455-118799282) | |
| 8-131, gnl|Mm7|chr4 (118799311-118799434) | |
| 8-131, gnl|monDom2|scaffold_43 (4218330-4218200) | |
| 8-131, gnl|panTro1|chr1 (43560662-43560835) | |
| 8-131, gnl|rheMac2|chr1 (45349151-45349324) | |
| 8-131, gnl|rn3|chr5 (140018187-140018014) | |
| 8-131, gnl|xenTro1|scaffold_225 (963279-963102) | |
| 271-447, gnl|bosTau2|chr11 (42513867-42513691) | |
| 271-447, gnl|Hg17|chr1 (42583405-42583229) | |
| 271-447, gnl|Mm7|chr4 (118813516-118813692) | |
| 616-740, gnl|bosTau2|chr11 (42499338-42499214) | |
| 616-740, gnl|canFam2|chr15 (3837811-3837698) | |
| 616-740, gnl|dasNov1|scaffold_13504 (49490-49381) | |
| 616-740, gnl|echTel1|scaffold_300011 (8884-8996) | |
| 616-740, gnl|galGal2|chr21 (6165227-6165115) | |
| 616-740, gnl|hg17|chr1 (42571180-42571293) | |
| 616-740, gnl|Hg17|chr1 (42571307-42571183) | |
| 616-740, gnl|mm7|chr4 (118821328-118821215) | |
| 616-740, gnl|Mm7|chr4 (118821199-118821323) | |
| 616-740, gnl|monDom2|scaffold_43 (4236531-4236418) | |
| 616-740, gnl|oryCun1|scaffold_181742 (41149-41036) | |
| 616-740, gnl|panTro1|chr1 (43541150-43541263) | |
| 616-740, gnl|rheMac2|chr1 (45331339-45331452) | |
| 616-740, gnl|rn3|chr5 (140041714-140041601) | |
| 616-740, gnl|xenTro1|scaffold_225 (970832-970720) |