Non-Coding RNA Search

Tes1-TES01D070102

Sequence:


               
               GGACCTAAGCATTCTGGAAACATAAGCGTCTTTCCAACATAGGTCTCGTTTCTGCCCTCC
TCTGTTTCCAAAGACCGCTTGCTCCATTGGGGTACTACTTTGTTTTGGTGTCAACCGCCG
CCTTCAGCGTACCAGCACCTTTCCTGAATAGCTGTCCTTGTAATTATCTGCTTTTTTACC
TCTGTTACTTCTGAAAAGCACTTTCGGAGAACCAAGTCTCAAATTCTATGATTACCATCT
CCAAGCCCTTTTCATCCTGTGGAAAAAGTCAGGAAATGGGTTTTCAGTTATTTTCTATGA
TAGCAAAAAGCCAGCCACCTTTCCTACGTCGCCTGCGTAGCCCGTAAATTGATTCCAAAG
CGATTACGCTGATTGCGTGAGGGGGGAGGTCAGTAGGTGGCGCTACGCTAGTGGCGTTGG
GGCCACTGAGCTAGGAGCGTAACATAGCGAGTGGGGCGGCCTCTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACCTAAGCATTCTGGAAACATAAGCGTCTTTCCAACATAGGTCTCGTTTCTGCCCTCC
TCTGTTTCCAAAGACCGCTTGCTCCATTGGGGTACTACTTTGTTTTGGTGTCAACCGCCG
CCTTCAGCGTACCAGCACCTTTCCTGAATAGCTGTCCTTGTAATTATCTGCTTTTTTACC
TCTGTTACTTCTGAAAAGCACTTTCGGAGAACCAAGTCTCAAATTCTATGATTACCATCT
CCAAGCCCTTTTCATCCTGTGGAAAAAGTCAGGAAATGGGTTTTCAGTTATTTTCTATGA
TAGCAAAAAGCCAGCCACCTTTCCTACGTCGCCTGCGTAGCCCGTAAATTGATTCCAAAG
CGATTACGCTGATTGCGTGAGGGGGGAGGTCAGTAGGTGGCGCTACGCTAGTGGCGTTGG
GGCCACTGAGCTAGGAGCGTAACATAGCGAGTGGGGCGGCCTCTGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               331-465, + strand, RNAz p=0.999475

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               331-465, + strand, RNAz p=0.999475

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               340-478, + strand, RNAmicro p=0.999276

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               340-478, + strand, RNAmicro p=0.999276

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               26-465, gnl|bosTau2|chr19 (20499077-20498631)
               

               
               26-465, gnl|Hg17|chr17 (7086971-7086529)
               

               
               26-465, gnl|Mm7|chr11 (70072736-70073129)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-465, gnl|bosTau2|chr19 (20499077-20498631)
               

               
               26-465, gnl|Hg17|chr17 (7086971-7086529)
               

               
               26-465, gnl|Mm7|chr11 (70072736-70073129)

	26-465, gnl\|bosTau2\|chr19 (20499077-20498631)
	26-465, gnl\|Hg17\|chr17 (7086971-7086529)
	26-465, gnl\|Mm7\|chr11 (70072736-70073129)