Non-Coding RNA Search

Tes1-TES01E060080

Sequence:


               
               ACTCCCGGTGCTGGTGCGGAAACTGGACCTCTCTGATACCAAATCCATCCGAGCCTTTGC
TGAGGGCTTTCTGACAGGTGAGGCCCAGTGGGTAGCTAGGAAAGCAGGATGCCGGGTGTG
GGAATGGTTGCCCCACCCTGGATCATCTCTGACCTTTAGATCAGAACCATCATGGATCCC
ACCAGACGGGTTCCACCACATGAACCAGCAGGGCAAGGAACTGACACAGGGTGGCAGGTG
AACAGGCTGGGCAGGATCCTTATTATCCTTTTGCCTCAGCAATGGGAATGTTGGAGGTGT
AAGCTCCCTGTCTGGGCTCGCACCTTGGCATCAAGGTGTGGCCCTGATGCCCATTCCCCT
TTCATCCTGAGAACCAACTTTCTGTGGCCACAGGTACTAGAGGAGGTTATGCTGCTGCCA
GAGTTCTTCCGGATCTTGGAAAATAACTAGCTTCTACCAAGGACTATGAAATCTATGAGG
GACAGGGTGCATGTCTATCTTGTTTGACCACTGCACGCCCAGTGCCCAGCCTGTGTCAGA
GACAGTACTGCATGCCCAACTAATGAATGAATGGTGTCCAGGAAGATATCAGCAACTGAA
ATTTGAAGCCCAATGGCAGTGGTTACTGATATCCCTGAGACAGGTCCAGAGGAAAGGAAC
AAACTCTCAGGACTGGGACAGGCAGCTAGTGGACTCTTGCTAACCATGTGGTCTCCTTGT
TTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTCCCGGTGCTGGTGCGGAAACTGGACCTCTCTGATACCAAATCCATCCGAGCCTTTGC
TGAGGGCTTTCTGACAGGTGAGGCCCAGTGGGTAGCTAGGAAAGCAGGATGCCGGGTGTG
GGAATGGTTGCCCCACCCTGGATCATCTCTGACCTTTAGATCAGAACCATCATGGATCCC
ACCAGACGGGTTCCACCACATGAACCAGCAGGGCAAGGAACTGACACAGGGTGGCAGGTG
AACAGGCTGGGCAGGATCCTTATTATCCTTTTGCCTCAGCAATGGGAATGTTGGAGGTGT
AAGCTCCCTGTCTGGGCTCGCACCTTGGCATCAAGGTGTGGCCCTGATGCCCATTCCCCT
TTCATCCTGAGAACCAACTTTCTGTGGCCACAGGTACTAGAGGAGGTTATGCTGCTGCCA
GAGTTCTTCCGGATCTTGGAAAATAACTAGCTTCTACCAAGGACTATGAAATCTATGAGG
GACAGGGTGCATGTCTATCTTGTTTGACCACTGCACGCCCAGTGCCCAGCCTGTGTCAGA
GACAGTACTGCATGCCCAACTAATGAATGAATGGTGTCCAGGAAGATATCAGCAACTGAA
ATTTGAAGCCCAATGGCAGTGGTTACTGATATCCCTGAGACAGGTCCAGAGGAAAGGAAC
AAACTCTCAGGACTGGGACAGGCAGCTAGTGGACTCTTGCTAACCATGTGGTCTCCTTGT
TTGTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               237-355, + strand, RNAz p=0.82902

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               237-355, + strand, RNAz p=0.82902

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-688, gnl|bosTau2|chr10 (53693137-53693836)
               

               
               1-688, gnl|Hg17|chr14 (67261647-67262489)
               

               
               1-688, gnl|Mm7|chr12 (77169943-77171084)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-688, gnl|bosTau2|chr10 (53693137-53693836)
               

               
               1-688, gnl|Hg17|chr14 (67261647-67262489)
               

               
               1-688, gnl|Mm7|chr12 (77169943-77171084)

	1-688, gnl\|bosTau2\|chr10 (53693137-53693836)
	1-688, gnl\|Hg17\|chr14 (67261647-67262489)
	1-688, gnl\|Mm7\|chr12 (77169943-77171084)